RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 VPS37CA5D8V6 355 aaPredicted RBP12.69□□□□□ -0.38
LAMB1-203ENST00000393560 SLC26A4O43511 780 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 MAP4K4O95819 1239 aaPredicted RBP12.69□□□□□ -0.38
LAMB1-203ENST00000393560 GGCXP38435 758 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 NEK2P51955 445 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 PHEXP78562 749 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 NAA16Q6N069 864 aaPredicted RBP12.69□□□□□ -0.38
LAMB1-203ENST00000393560 LRRC27Q9C0I9 530 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.69□□□□□ -0.38
LAMB1-203ENST00000393560 SLC5A4Q9NY91 659 aa12.69□□□□□ -0.38
LAMB1-203ENST00000393560 R3HDM2Q9Y2K5 976 aaKnown RBP12.69□□□□□ -0.38
LAMB1-203ENST00000393560 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 STXBP3O00186 592 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 ZBTB7BO15156 539 aaPredicted RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 HSPA4P34932 840 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 USP11P51784 963 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 FOSBP53539 338 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 ARPC4P59998 168 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 ITGA7Q13683 1181 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 P3H1Q32P28 736 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 SREK1Q8WXA9 508 aaKnown RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 INTS4Q96HW7 963 aaKnown RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 EVI5O60447 810 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 HNRNPCP07910 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 ZSCAN22P10073 491 aaPredicted RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 TUBP50607 506 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 USP46P62068 366 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 PDCLQ13371 301 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 SLC4A10Q6U841 1118 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 NEK10Q6ZWH5 1172 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 MSANTD4Q8NCY6 345 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 LSM14AQ8ND56 463 aaKnown RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 ACTR5Q9H9F9 607 aaPredicted RBP12.68□□□□□ -0.38
LAMB1-203ENST00000393560 GMEB1Q9Y692 573 aa12.68□□□□□ -0.38
LAMB1-203ENST00000393560 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 ATP2C2O75185 946 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 IL13P35225 146 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 STAT6P42226 847 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 CCDC38Q502W7 563 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 EMC10Q5UCC4 262 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 OTUD6AQ7L8S5 288 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 SRGAP1Q7Z6B7 1085 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 CCDC68Q9H2F9 335 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 DACT1Q9NYF0 836 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 ZNF180Q9UJW8 692 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 ASB3Q9Y575 518 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 PENKP01210 267 aaPredicted RBP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 HOXD10P28358 340 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 CCSAPQ6IQ19 270 aaPredicted RBP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 EXOC3L1Q86VI1 746 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 ZNF713Q8N859 430 aaPredicted RBP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 GDAP1L1Q96MZ0 367 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 OSBPL5Q9H0X9 879 aaPredicted RBP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
LAMB1-203ENST00000393560 NOP53Q9NZM5 478 aaKnown RBP12.67□□□□□ -0.38
LAMB1-203ENST00000393560 DNM1LO00429 736 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 ABHD8Q96I13 439 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 ZMAT2Q96NC0 199 aaKnown RBP12.66□□□□□ -0.38
LAMB1-203ENST00000393560 TMCO1Q9UM00 188 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 KIF5BP33176 963 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 LRP8Q14114 963 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 ANKRD13BQ86YJ7 626 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 GABPB2Q8TAK5 448 aaPredicted RBP12.66□□□□□ -0.38
LAMB1-203ENST00000393560 INIPQ9NRY2 104 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 MRGBPQ9NV56 204 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 F6X3S4 739 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 VAMP4O75379 141 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 NPTXRO95502 500 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 KCNJ6P48051 423 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 PDE6CP51160 858 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 GUCY2FP51841 1108 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 ADAM9Q13443 819 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 DRP2Q13474 957 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 STIM1Q13586 685 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 MCM10Q7L590 875 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 MAEAQ7L5Y9 396 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 SYNCQ9H7C4 482 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 SSX2IPQ9Y2D8 614 aa12.66□□□□□ -0.38
LAMB1-203ENST00000393560 USP6P35125 1406 aa12.65□□□□□ -0.38
LAMB1-203ENST00000393560 VWA3AA6NCI4 1184 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms