RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 MYH6P13533 1939 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 DOCK2Q92608 1830 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 SHANK3Q9BYB0 1731 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 TCP11X2Q5H9J9 407 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 TTC38Q5R3I4 469 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 ADGRA1Q86SQ6 560 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 ESR2Q92731 530 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 TRIM10Q9UDY6 481 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 REXO2Q9Y3B8 237 aaKnown RBP15.16■□□□□ 0.02
SKA3-202ENST00000314759 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 RTL9Q8NET4 1388 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 ATP2C1P98194 919 aaPredicted RBP15.16■□□□□ 0.02
SKA3-202ENST00000314759 PDXDC2PQ6P474 469 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 CADPS2Q86UW7 1296 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 LRP2BPQ9P2M1 347 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 KCNJ18B7U540 433 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 RPS6KA5O75582 802 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 GTF2A1P52655 376 aaPredicted RBP15.16■□□□□ 0.02
SKA3-202ENST00000314759 PAK1Q13153 545 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 KCNJ12Q14500 433 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 SKIDA1Q1XH10 827 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 ICE2Q659A1 982 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 SLC4A9Q96Q91 983 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 GBP3Q9H0R5 595 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 ZBTB1Q9Y2K1 713 aa15.16■□□□□ 0.02
SKA3-202ENST00000314759 DCCP43146 1447 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
SKA3-202ENST00000314759 MAGEA9P43362 315 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 NELFBQ8WX92 580 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
SKA3-202ENST00000314759 GUCA1BQ9UMX6 200 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 EPN1Q9Y6I3 576 aaPredicted RBP15.15■□□□□ 0.02
SKA3-202ENST00000314759 IL17AQ16552 155 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 WDR93Q6P2C0 686 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 MAPK8IP1Q9UQF2 711 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 BCORQ6W2J9 1755 aa15.15■□□□□ 0.02
SKA3-202ENST00000314759 NDUFA10O95299 355 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 TUBBP07437 444 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 CYP7A1P22680 504 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 SPAG1Q07617 926 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 TRIM14Q14142 442 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 TTC31Q49AM3 519 aaPredicted RBP15.14■□□□□ 0.01
SKA3-202ENST00000314759 FAM204AQ9H8W3 233 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 ANAPC4Q9UJX5 808 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 LRP5O75197 1615 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 UBXN1Q04323 297 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 TROAPQ12815 778 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
SKA3-202ENST00000314759 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 FAM71BQ8TC56 605 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
SKA3-202ENST00000314759 ENC1O14682 589 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 GTPBP6O43824 516 aaPredicted RBP15.13■□□□□ 0.01
SKA3-202ENST00000314759 HSP90B2PQ58FF3 399 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 TRAPPC11Q7Z392 1133 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 HDAC6Q9UBN7 1215 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 GDAQ9Y2T3 454 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 TTC26A0AVF1 554 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 ZNF658Q5TYW1 1059 aaPredicted RBP15.13■□□□□ 0.01
SKA3-202ENST00000314759 IRF2BP1Q8IU81 584 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 ZNF34Q8IZ26 560 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 GOLGA6L1Q8N7Z2 621 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 ANKRD20A12PQ8NF67 263 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 JRKLQ9Y4A0 524 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 SOS2Q07890 1332 aaPredicted RBP15.13■□□□□ 0.01
SKA3-202ENST00000314759 CYP2D7A0A087X1C5 515 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 PRCPP42785 496 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
SKA3-202ENST00000314759 TFR2Q9UP52 801 aa15.13■□□□□ 0.01
SKA3-202ENST00000314759 IQSEC3Q9UPP2 1182 aaPredicted RBP15.13■□□□□ 0.01
SKA3-202ENST00000314759 PSMD14O00487 310 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 ADAMTS3O15072 1205 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 RPN1P04843 607 aaKnown RBP15.12■□□□□ 0.01
SKA3-202ENST00000314759 CORO7P57737 925 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
SKA3-202ENST00000314759 CCDC148Q8NFR7 591 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
SKA3-202ENST00000314759 BAZ2BQ9UIF8 2168 aaKnown RBP15.12■□□□□ 0.01
SKA3-202ENST00000314759 MCM7P33993 719 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 OR8K1Q8NGG5 319 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 MED4Q9NPJ6 270 aa15.12■□□□□ 0.01
SKA3-202ENST00000314759 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 ERVV-1B6SEH8 477 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 USP14P54578 494 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 TMTC3Q6ZXV5 915 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 MMS19Q96T76 1030 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 ABCF2Q9UG63 623 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
SKA3-202ENST00000314759 MYH2Q9UKX2 1941 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 SLIT2O94813 1529 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 TRIM49BA6NDI0 452 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 SRGAP2O75044 1071 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 SYF2O95926 243 aaKnown RBP15.11■□□□□ 0.01
SKA3-202ENST00000314759 ATP1A1P05023 1023 aaKnown RBP15.11■□□□□ 0.01
SKA3-202ENST00000314759 PARP1P09874 1014 aaKnown RBP15.11■□□□□ 0.01
SKA3-202ENST00000314759 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
SKA3-202ENST00000314759 EVA1CP58658 441 aa15.11■□□□□ 0.01
SKA3-202ENST00000314759 SUSD4Q5VX71 490 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms