RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PAK1Q13153 545 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 GPIHBP1Q8IV16 184 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 RIN2Q8WYP3 895 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-201ENST00000262395 ZSCAN10Q96SZ4 725 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-201ENST00000262395 CWC15Q9P013 229 aaKnown RBP20.26■□□□□ 0.83
TRAF4-201ENST00000262395 FUT2Q10981 343 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 RSPH14Q9UHP6 348 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 TTC26A0AVF1 554 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 PRCPP42785 496 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 SLC20A2Q08357 652 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 CATIPQ7Z7H3 387 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 FERMT2Q96AC1 680 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 RASSF4Q9H2L5 321 aa20.26■□□□□ 0.83
TRAF4-201ENST00000262395 EPN1Q9Y6I3 576 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-201ENST00000262395 ATP1A1P05023 1023 aaKnown RBP20.25■□□□□ 0.83
TRAF4-201ENST00000262395 IQUBQ8NA54 791 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 MMS19Q96T76 1030 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 LIMA1Q9UHB6 759 aaKnown RBP20.25■□□□□ 0.83
TRAF4-201ENST00000262395 MYH6P13533 1939 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 NDUFA10O95299 355 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 GNAT2P19087 354 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 PIP4K2BP78356 416 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 NPY5RQ15761 445 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 WHAMMP3Q1A5X7 153 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 FAM204AQ9H8W3 233 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 PSD3Q9NYI0 1048 aa20.25■□□□□ 0.83
TRAF4-201ENST00000262395 CYP19A1P11511 503 aaPredicted RBP20.24■□□□□ 0.83
TRAF4-201ENST00000262395 PMS1P54277 932 aaKnown RBP20.24■□□□□ 0.83
TRAF4-201ENST00000262395 E2F4Q16254 413 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 SUSD4Q5VX71 490 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 SRLQ86TD4 932 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 CCDC51Q96ER9 411 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 NID2Q14112 1375 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 GYG1P46976 350 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 NLRP5P59047 1200 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 AMPD2Q01433 879 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 FAM47AQ5JRC9 791 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 RASGRP4Q8TDF6 673 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 BRMS1Q9HCU9 246 aa20.24■□□□□ 0.83
TRAF4-201ENST00000262395 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
TRAF4-201ENST00000262395 PP2D1A8MPX8 630 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 PDXDC2PQ6P474 469 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 RASSF8Q8NHQ8 419 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 CARD10Q9BWT7 1032 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 PRPF3O43395 683 aaKnown RBP20.23■□□□□ 0.83
TRAF4-201ENST00000262395 RPN1P04843 607 aaKnown RBP20.23■□□□□ 0.83
TRAF4-201ENST00000262395 ATP2C1P98194 919 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-201ENST00000262395 ITIH6Q6UXX5 1313 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 PNPLA7Q6ZV29 1317 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
TRAF4-201ENST00000262395 ANKRD20A12PQ8NF67 263 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 RWDD2AQ9UIY3 292 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 MYH2Q9UKX2 1941 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 MTMR7Q9Y216 660 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 RTL9Q8NET4 1388 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 SEMA3EO15041 775 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 CCDC122Q5T0U0 273 aa20.23■□□□□ 0.83
TRAF4-201ENST00000262395 ZNF185O15231 689 aa20.22■□□□□ 0.83
TRAF4-201ENST00000262395 PARP1P09874 1014 aaKnown RBP20.22■□□□□ 0.83
TRAF4-201ENST00000262395 MRPS25P82663 173 aaKnown RBP20.22■□□□□ 0.83
TRAF4-201ENST00000262395 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
TRAF4-201ENST00000262395 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
TRAF4-201ENST00000262395 DUSP10Q9Y6W6 482 aa20.22■□□□□ 0.83
TRAF4-201ENST00000262395 KLK7P49862 253 aa20.22■□□□□ 0.83
TRAF4-201ENST00000262395 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.22■□□□□ 0.83
TRAF4-201ENST00000262395 IRF2BP1Q8IU81 584 aa20.22■□□□□ 0.83
TRAF4-201ENST00000262395 TNFRSF25Q93038 417 aa20.22■□□□□ 0.83
TRAF4-201ENST00000262395 TROAPQ12815 778 aa20.21■□□□□ 0.83
TRAF4-201ENST00000262395 COL5A2P05997 1499 aaPredicted RBP20.21■□□□□ 0.83
TRAF4-201ENST00000262395 RNF40O75150 1001 aa20.21■□□□□ 0.83
TRAF4-201ENST00000262395 FECHP22830 423 aa20.21■□□□□ 0.83
TRAF4-201ENST00000262395 HERVK_113P62684 666 aa20.21■□□□□ 0.83
TRAF4-201ENST00000262395 GNL3LQ9NVN8 582 aaKnown RBP20.21■□□□□ 0.83
TRAF4-201ENST00000262395 LRRC10BA6NIK2 292 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 GTPBP6O43824 516 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-201ENST00000262395 LUC7L2Q9Y383 392 aaKnown RBP20.2■□□□□ 0.82
TRAF4-201ENST00000262395 RCCD1A6NED2 376 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 TUBB2AQ13885 445 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 CT47A1Q5JQC4 288 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-201ENST00000262395 ZNF658Q5TYW1 1059 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-201ENST00000262395 LRRC31Q6UY01 552 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 GPKOWQ92917 476 aaPredicted RBP eCLIP20.2■□□□□ 0.82
TRAF4-201ENST00000262395 TUBB2BQ9BVA1 445 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 GBP3Q9H0R5 595 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 TSPYL1Q9H0U9 437 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 RABEP2Q9H5N1 569 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 AGPAT5Q9NUQ2 364 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 ZNF142P52746 1687 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-201ENST00000262395 STAT6P42226 847 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 CYP27A1Q02318 531 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 CHRNDQ07001 517 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 KIAA1328Q86T90 577 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 IQCA1Q86XH1 822 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 OR8K1Q8NGG5 319 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 FAM71BQ8TC56 605 aa20.2■□□□□ 0.82
TRAF4-201ENST00000262395 MACROD2A1Z1Q3 448 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 USP17L12C9JPN9 530 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 USP17L21D6R901 530 aa20.19■□□□□ 0.82
TRAF4-201ENST00000262395 MYBL2P10244 700 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms