RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 INHBEP58166 350 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 PPP4R3BQ5MIZ7 849 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 GADL1Q6ZQY3 521 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 FASTKD5Q7L8L6 764 aaKnown RBP21.18■□□□□ 0.98
COMMD4-222ENST00000568034 DGKHQ86XP1 1220 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 IFNL1Q8IU54 200 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 FAM43AQ8N2R8 423 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 JAKMIP1Q96N16 626 aaKnown RBP21.18■□□□□ 0.98
COMMD4-222ENST00000568034 TMEM47Q9BQJ4 181 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 SH2D4AQ9H788 454 aa21.18■□□□□ 0.98
COMMD4-222ENST00000568034 PRC1O43663 620 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 CPA1P15085 419 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 VCAM1P19320 739 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 MCM5P33992 734 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 ANAPC15P60006 121 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 EXOSC10Q01780 885 aaKnown RBP21.17■□□□□ 0.98
COMMD4-222ENST00000568034 ANKRD23Q86SG2 305 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 REM2Q8IYK8 340 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-222ENST00000568034 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 GMCL1P1Q8NEA9 526 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 IGDCC4Q8TDY8 1250 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 TTC14Q96N46 770 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 UBAC1Q9BSL1 405 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 SENP2Q9HC62 589 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 GPHNQ9NQX3 736 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-222ENST00000568034 AGTPBP1Q9UPW5 1226 aa21.17■□□□□ 0.98
COMMD4-222ENST00000568034 WDR19Q8NEZ3 1342 aa21.16■□□□□ 0.98
COMMD4-222ENST00000568034 NDUFB10O96000 172 aa21.16■□□□□ 0.98
COMMD4-222ENST00000568034 TOP1P11387 765 aaKnown RBP21.16■□□□□ 0.98
COMMD4-222ENST00000568034 CCDC178Q5BJE1 867 aa21.16■□□□□ 0.98
COMMD4-222ENST00000568034 DHX32Q7L7V1 743 aaKnown RBP21.16■□□□□ 0.98
COMMD4-222ENST00000568034 RASGRP2Q7LDG7 609 aa21.16■□□□□ 0.98
COMMD4-222ENST00000568034 MTA3Q9BTC8 594 aa21.16■□□□□ 0.98
COMMD4-222ENST00000568034 TMOD4Q9NZQ9 345 aa21.16■□□□□ 0.98
COMMD4-222ENST00000568034 F5H6K3 240 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 SH2B2O14492 632 aaPredicted RBP21.15■□□□□ 0.98
COMMD4-222ENST00000568034 IFIT3O14879 490 aaKnown RBP21.15■□□□□ 0.98
COMMD4-222ENST00000568034 KLRC3Q07444 240 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 SPICE1Q8N0Z3 855 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 LPAR1Q92633 364 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 TCEANC2Q96MN5 208 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 LRRC2Q9BYS8 371 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 TM6SF1Q9BZW5 370 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 LY9Q9HBG7 655 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 ZSWIM6Q9HCJ5 1215 aa21.15■□□□□ 0.98
COMMD4-222ENST00000568034 CASTP20810 708 aaKnown RBP21.14■□□□□ 0.97
COMMD4-222ENST00000568034 RPS6KB1P23443 525 aa21.14■□□□□ 0.97
COMMD4-222ENST00000568034 RBM25P49756 843 aaKnown RBP21.14■□□□□ 0.97
COMMD4-222ENST00000568034 TMEM67Q5HYA8 995 aa21.14■□□□□ 0.97
COMMD4-222ENST00000568034 TMEM87BQ96K49 555 aa21.14■□□□□ 0.97
COMMD4-222ENST00000568034 GOPCQ9HD26 462 aa21.14■□□□□ 0.97
COMMD4-222ENST00000568034 ZCCHC17Q9NP64 241 aaKnown RBP21.14■□□□□ 0.97
COMMD4-222ENST00000568034 SLC45A1Q9Y2W3 748 aa21.14■□□□□ 0.97
COMMD4-222ENST00000568034 PDHXO00330 501 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 HMGB1P09429 215 aaKnown RBP21.13■□□□□ 0.97
COMMD4-222ENST00000568034 PSMA5P28066 241 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 HOXA7P31268 230 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-222ENST00000568034 IFIT1BQ5T764 474 aaKnown RBP21.13■□□□□ 0.97
COMMD4-222ENST00000568034 SLFN13Q68D06 897 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 BLOC1S2Q6QNY1 142 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 NUP88Q99567 741 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-222ENST00000568034 KIF2CQ99661 725 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 PCNTO95613 3336 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 RLFQ13129 1914 aa21.13■□□□□ 0.97
COMMD4-222ENST00000568034 WDR46O15213 610 aaKnown RBP21.12■□□□□ 0.97
COMMD4-222ENST00000568034 SNHG28P0DPA3 235 aa21.12■□□□□ 0.97
COMMD4-222ENST00000568034 WTAPQ15007 396 aa21.12■□□□□ 0.97
COMMD4-222ENST00000568034 SART3Q15020 963 aaKnown RBP21.12■□□□□ 0.97
COMMD4-222ENST00000568034 PNMA1Q8ND90 353 aa21.12■□□□□ 0.97
COMMD4-222ENST00000568034 GMCL1Q96IK5 515 aa21.12■□□□□ 0.97
COMMD4-222ENST00000568034 UPF3BQ9BZI7 483 aaKnown RBP21.12■□□□□ 0.97
COMMD4-222ENST00000568034 RPAP3Q9H6T3 665 aaPredicted RBP21.12■□□□□ 0.97
COMMD4-222ENST00000568034 WBP1LQ9NX94 342 aa21.12■□□□□ 0.97
COMMD4-222ENST00000568034 PARP14Q460N5 1801 aa21.12■□□□□ 0.97
COMMD4-222ENST00000568034 ADGRA2Q96PE1 1338 aa21.11■□□□□ 0.97
COMMD4-222ENST00000568034 PDHBP11177 359 aa21.11■□□□□ 0.97
COMMD4-222ENST00000568034 FAM83BQ5T0W9 1011 aa21.11■□□□□ 0.97
COMMD4-222ENST00000568034 CATSPERGQ6ZRH7 1159 aa21.11■□□□□ 0.97
COMMD4-222ENST00000568034 RUFY3Q7L099 469 aa21.11■□□□□ 0.97
COMMD4-222ENST00000568034 KAT14Q9H8E8 782 aa21.11■□□□□ 0.97
COMMD4-222ENST00000568034 RNF186Q9NXI6 227 aa21.11■□□□□ 0.97
COMMD4-222ENST00000568034 ERICH2A1L162 156 aa21.1■□□□□ 0.97
COMMD4-222ENST00000568034 LIFRP42702 1097 aa21.1■□□□□ 0.97
COMMD4-222ENST00000568034 MAP2K1Q02750 393 aaPredicted RBP21.1■□□□□ 0.97
COMMD4-222ENST00000568034 FBXL16Q8N461 479 aa21.1■□□□□ 0.97
COMMD4-222ENST00000568034 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
COMMD4-222ENST00000568034 CFHR5Q9BXR6 569 aa21.1■□□□□ 0.97
COMMD4-222ENST00000568034 AGXT2Q9BYV1 514 aa21.1■□□□□ 0.97
COMMD4-222ENST00000568034 ASCC2Q9H1I8 757 aaPredicted RBP21.1■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L15C9J2P7 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L13C9JLJ4 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L11C9JVI0 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L18D6R9N7 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L22D6RA61 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L17D6RBQ6 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L19D6RCP7 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L20D6RJB6 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 RAD21O60216 631 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 ALDH1A1P00352 501 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms