RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 IGSF3O75054 1194 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 STK10O94804 968 aaKnown RBP5.65□□□□□ -1.5
HERC1-215ENST00000561436 TAL1P17542 331 aaPredicted RBP5.65□□□□□ -1.5
HERC1-215ENST00000561436 ATF4P18848 351 aaPredicted RBP5.65□□□□□ -1.5
HERC1-215ENST00000561436 GTF2F1P35269 517 aaKnown RBP eCLIP5.65□□□□□ -1.5
HERC1-215ENST00000561436 ZNF165P49910 485 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 PRKCQQ04759 706 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 TNK2Q07912 1038 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 ZNF792Q3KQV3 632 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 ARSHQ5FYA8 562 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 CYB5RLQ6IPT4 315 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 Q96M66 194 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 FBXL18Q96ME1 805 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 HIRIP3Q9BW71 556 aaPredicted RBP5.65□□□□□ -1.5
HERC1-215ENST00000561436 EFR3BQ9Y2G0 817 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 TACC3Q9Y6A5 838 aa5.65□□□□□ -1.5
HERC1-215ENST00000561436 PITPNM2Q9BZ72 1349 aa5.65□□□□□ -1.51
HERC1-215ENST00000561436 RNASE1P07998 156 aaKnown RBP5.64□□□□□ -1.51
HERC1-215ENST00000561436 IMPDH2P12268 514 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 NASPP49321 788 aaPredicted RBP5.64□□□□□ -1.51
HERC1-215ENST00000561436 MLECQ14165 292 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 TMEM201Q5SNT2 666 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 MCTP1Q6DN14 999 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 OVOS1Q6IE37 1185 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 PHACTR4Q8IZ21 702 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 CYB5D2Q8WUJ1 264 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 CRBNQ96SW2 442 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 LRRC3Q9BY71 257 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 MKNK2Q9HBH9 465 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 SEMA3GQ9NS98 782 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 MBNL3Q9NUK0 354 aaKnown RBP5.64□□□□□ -1.51
HERC1-215ENST00000561436 ZSWIM5Q9P217 1185 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 VAV3Q9UKW4 847 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 ST14Q9Y5Y6 855 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 PRR36Q9H6K5 1346 aa5.64□□□□□ -1.51
HERC1-215ENST00000561436 URB2Q14146 1524 aaKnown RBP5.64□□□□□ -1.51
HERC1-215ENST00000561436 SLC22A31A6NKX4 558 aa5.63□□□□□ -1.51
HERC1-215ENST00000561436 ZNF865P0CJ78 1059 aaPredicted RBP5.63□□□□□ -1.51
HERC1-215ENST00000561436 FUT4P22083 530 aa5.63□□□□□ -1.51
HERC1-215ENST00000561436 YARSP54577 528 aaKnown RBP5.63□□□□□ -1.51
HERC1-215ENST00000561436 SLITRK4Q8IW52 837 aa5.63□□□□□ -1.51
HERC1-215ENST00000561436 CKAP2LQ8IYA6 745 aa5.63□□□□□ -1.51
HERC1-215ENST00000561436 UBE2FQ969M7 185 aa5.63□□□□□ -1.51
HERC1-215ENST00000561436 ZNF512BQ96KM6 892 aaPredicted RBP5.63□□□□□ -1.51
HERC1-215ENST00000561436 FERD3LQ96RJ6 166 aa5.63□□□□□ -1.51
HERC1-215ENST00000561436 CARS2Q9HA77 564 aaKnown RBP5.63□□□□□ -1.51
HERC1-215ENST00000561436 CEP131Q9UPN4 1083 aa5.63□□□□□ -1.51
HERC1-215ENST00000561436 R3HCC1Q9Y3T6 440 aaKnown RBP5.63□□□□□ -1.51
HERC1-215ENST00000561436 UBOX5O94941 541 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 FGRP09769 529 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 SOX9P48436 509 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 ZP2Q05996 745 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 FBXW10Q5XX13 1052 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 SLFN12Q8IYM2 578 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 STK11IPQ8N1F8 1099 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 LRRN4CLQ8ND94 238 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 MISP3Q96FF7 219 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 RC3H2Q9HBD1 1191 aaKnown RBP5.62□□□□□ -1.51
HERC1-215ENST00000561436 GINM1Q9NU53 330 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 PPT2Q9UMR5 302 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 COL17A1Q9UMD9 1497 aaPredicted RBP5.62□□□□□ -1.51
HERC1-215ENST00000561436 ARHGEF11O15085 1522 aa5.62□□□□□ -1.51
HERC1-215ENST00000561436 SHISA3A0PJX4 238 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 RAG1P15918 1043 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 ETV3P41162 512 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 CLCN7P51798 805 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 ANGEL2Q5VTE6 544 aaKnown RBP5.61□□□□□ -1.51
HERC1-215ENST00000561436 CCDC81Q6ZN84 652 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 CBLL1Q75N03 491 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 MCF2L2Q86YR7 1114 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 REXO1Q8N1G1 1221 aaKnown RBP5.61□□□□□ -1.51
HERC1-215ENST00000561436 AGBL5Q8NDL9 886 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 PI4K2BQ8TCG2 481 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 KREMEN1Q96MU8 473 aa5.61□□□□□ -1.51
HERC1-215ENST00000561436 SRRTQ9BXP5 876 aaKnown RBP5.61□□□□□ -1.51
HERC1-215ENST00000561436 GBP1P32455 592 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 SNW1Q13573 536 aaKnown RBP5.6□□□□□ -1.51
HERC1-215ENST00000561436 LRRFIP1Q32MZ4 808 aaKnown RBP5.6□□□□□ -1.51
HERC1-215ENST00000561436 TNNI3KQ59H18 835 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 DTWD2Q8NBA8 298 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 OR6P1Q8NGX9 317 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 ASB11Q8WXH4 323 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 DHX38Q92620 1227 aaKnown RBP5.6□□□□□ -1.51
HERC1-215ENST00000561436 ATG4CQ96DT6 458 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 CCDC74BQ96LY2 380 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 DNAJC2Q99543 621 aaKnown RBP5.6□□□□□ -1.51
HERC1-215ENST00000561436 MINPP1Q9UNW1 487 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 SNX11Q9Y5W9 270 aa5.6□□□□□ -1.51
HERC1-215ENST00000561436 U2SURPO15042 1029 aaKnown RBP5.59□□□□□ -1.51
HERC1-215ENST00000561436 CYP7A1P22680 504 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 EIF6P56537 245 aaKnown RBP5.59□□□□□ -1.51
HERC1-215ENST00000561436 NBPF6Q5VWK0 638 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 ZNF746Q6NUN9 644 aaPredicted RBP5.59□□□□□ -1.51
HERC1-215ENST00000561436 RUFY4Q6ZNE9 571 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 C22orf34Q6ZV56 151 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 ANAPC16Q96DE5 110 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 NBPF4Q96M43 638 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
HERC1-215ENST00000561436 DUSP15Q9H1R2 295 aaPredicted RBP5.59□□□□□ -1.51
HERC1-215ENST00000561436 FAM86C1Q9NVL1 165 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms