RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 APOA5Q6Q788 366 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-212ENST00000556541 VCPKMTQ9H867 229 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 KAT14Q9H8E8 782 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 ZNF408Q9H9D4 720 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-212ENST00000556541 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 THSD7BQ9C0I4 1608 aa13.19□□□□□ -0.3
FOXN3-212ENST00000556541 A0A0G2JLL6 359 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-212ENST00000556541 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 CPA1P15085 419 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 HUNKP57058 714 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 FGD1P98174 961 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 PRKG1Q13976 671 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 SHROOM1Q2M3G4 852 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-212ENST00000556541 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 MOB2Q70IA6 237 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 CHST3Q7LGC8 479 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 PRRT2Q7Z6L0 340 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-212ENST00000556541 CATIPQ7Z7H3 387 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-212ENST00000556541 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 BRF1Q92994 677 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 WNK4Q96J92 1243 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 CLMNQ96JQ2 1002 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 ZKSCAN3Q9BRR0 538 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 FZD1Q9UP38 647 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 LIMCH1Q9UPQ0 1083 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
FOXN3-212ENST00000556541 RLFQ13129 1914 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
FOXN3-212ENST00000556541 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 GPATCH4Q5T3I0 446 aaKnown RBP13.17□□□□□ -0.3
FOXN3-212ENST00000556541 SPRYD7Q5W111 196 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 RGMBQ6NW40 437 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 SYNE3Q6ZMZ3 975 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 ELP3Q9H9T3 547 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 ZCCHC17Q9NP64 241 aaKnown RBP13.17□□□□□ -0.3
FOXN3-212ENST00000556541 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
FOXN3-212ENST00000556541 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 TESPA1A2RU30 521 aaPredicted RBP13.16□□□□□ -0.3
FOXN3-212ENST00000556541 F5H6K3 240 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 ZBTB43O43298 467 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 PFKFB2O60825 505 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 SLC10A3P09131 477 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 PDHBP11177 359 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 PDIA3P30101 505 aaKnown RBP13.16□□□□□ -0.3
FOXN3-212ENST00000556541 KIF5BP33176 963 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 GNAQP50148 359 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 GTF2A2P52657 109 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 KLRC3Q07444 240 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 SPP2Q13103 211 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 SNAPC2Q13487 334 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 GRM4Q14833 912 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 FASTKD5Q7L8L6 764 aaKnown RBP13.16□□□□□ -0.3
FOXN3-212ENST00000556541 RASAL3Q86YV0 1011 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
FOXN3-212ENST00000556541 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 LRRC2Q9BYS8 371 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
FOXN3-212ENST00000556541 BRPF3Q9ULD4 1205 aa13.16□□□□□ -0.3
FOXN3-212ENST00000556541 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 PALM3A6NDB9 673 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-212ENST00000556541 IRF6O14896 467 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 NDUFB10O96000 172 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-212ENST00000556541 GJA5P36382 358 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 ECE1P42892 770 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 INHBEP58166 350 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 FEZ1Q99689 392 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 SENP2Q9HC62 589 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-212ENST00000556541 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 A0A0G2JMZ2 1700 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 MYH6P13533 1939 aa13.15□□□□□ -0.3
FOXN3-212ENST00000556541 MANSC4A6NHS7 340 aaPredicted RBP13.14□□□□□ -0.31
FOXN3-212ENST00000556541 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
FOXN3-212ENST00000556541 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
FOXN3-212ENST00000556541 FDX1P10109 184 aa13.14□□□□□ -0.31
FOXN3-212ENST00000556541 CETPP11597 493 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms