RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 ITGAVP06756 1048 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 C6orf222P0C671 652 aaPredicted RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 NAT2P11245 290 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 FGFR1P11362 822 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 PABPC1P11940 636 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 PTPRAP18433 802 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 EIF2AK2P19525 551 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 POLR2BP30876 1174 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 GRIA2P42262 883 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 ID4P47928 161 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 NEK4P51957 841 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 TMPRSS15P98073 1019 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 PURAQ00577 322 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 PDE4BQ07343 736 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 AP3B2Q13367 1082 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 MORC3Q14149 939 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 ZNF460Q14592 562 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 SETDB1Q15047 1291 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 SYDE2Q5VT97 1194 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 CXorf57Q6NSI4 855 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 CLEC4GQ6UXB4 293 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 NSMFQ6X4W1 530 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 HDXQ7Z353 690 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 BRAPQ7Z569 592 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 FGD2Q7Z6J4 655 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 ZNF227Q86WZ6 799 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 CNTD1Q8N815 330 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 LRRN4CLQ8ND94 238 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 FBXO41Q8TF61 875 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 COG1Q8WTW3 980 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 OSBP2Q969R2 916 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 E2F7Q96AV8 911 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 ZNF512BQ96KM6 892 aaPredicted RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 TTC1Q99614 292 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 LACRTQ9GZZ8 138 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 IGFLR1Q9H665 355 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC52A2Q9HAB3 445 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 FBRSQ9HAH7 460 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 SH2B1Q9NRF2 756 aaPredicted RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 DNAJB12Q9NXW2 375 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 OBP2AQ9NY56 170 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 SUCOQ9UBS9 1254 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 KLHL3Q9UH77 587 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 NDOR1Q9UHB4 597 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 INTUQ9ULD6 942 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 TNPO3Q9Y5L0 923 aaKnown RBP3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 TACC3Q9Y6A5 838 aa3.29□□□□□ -1.88
SCARNA3-201ENST00000517097 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 VSTM5A8MXK1 200 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 SOX1O00570 391 aaPredicted RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 NEMP1O14524 444 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 ZEB2O60315 1214 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 FBXO21O94952 628 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 ARHGEF15O94989 841 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 APBA3O96018 575 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 FGAP02671 866 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 ASLP04424 464 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 CAPNS1P04632 268 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 TP53P04637 393 aaPredicted RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 PGRP06401 933 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 EPHX1P07099 455 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 IFIT2P09913 472 aaKnown RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 JMJD7P0C870 316 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 SLURP2P0DP57 97 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 RAG1P15918 1043 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 BPIP17213 487 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 CD33P20138 364 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 PMS1P54277 932 aaKnown RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 RASSF7Q02833 373 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 FOXD4Q12950 439 aaPredicted RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 TCIRG1Q13488 830 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 IKBKEQ14164 716 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 BBS9Q3SYG4 887 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 TDRD10Q5VZ19 366 aaKnown RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 IL31Q6EBC2 164 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 RIPOR1Q6ZS17 1223 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 SV2AQ7L0J3 742 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 CYFIP1Q7L576 1253 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 PPFIBP1Q86W92 1011 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 TEX2Q8IWB9 1127 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 IFNL3Q8IZI9 196 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 SPICE1Q8N0Z3 855 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 SVOPQ8N4V2 548 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 GSTCDQ8NEC7 633 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 PI4K2BQ8TCG2 481 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 PPM1EQ8WY54 764 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 USP7Q93009 1102 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 PPP1R14AQ96A00 147 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 ELMO3Q96BJ8 720 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 ACSF2Q96CM8 615 aaPredicted RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 SCLYQ96I15 445 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 FGD4Q96M96 766 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 NAP1L4Q99733 375 aaKnown RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 LGR4Q9BXB1 951 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 NUCKS1Q9H1E3 243 aaKnown RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 IFT22Q9H7X7 185 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 LUC7LQ9NQ29 371 aaKnown RBP3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 KRT82Q9NSB4 513 aa3.28□□□□□ -1.88
SCARNA3-201ENST00000517097 NDFIP2Q9NV92 336 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms