RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 LAMTOR5O43504 91 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 LGR5O75473 907 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 SLITRK5O94991 958 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 C1SP09871 688 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 PROZP22891 400 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 NTF4P34130 210 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 WASP42768 502 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 SARSP49591 514 aaKnown RBP0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 EGR3Q06889 387 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 KIF4BQ2VIQ3 1234 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 KRT71Q3SY84 523 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 SFRP5Q5T4F7 317 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 CIR1Q86X95 450 aaPredicted RBP0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 ANKS4BQ8N8V4 417 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 LINC01599Q8WXQ3 324 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 DHX38Q92620 1227 aaKnown RBP0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 BHLHE41Q9C0J9 482 aaPredicted RBP0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 CRTAC1Q9NQ79 661 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 SLC2A4RGQ9NR83 387 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 SPATA6Q9NWH7 488 aaPredicted RBP0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 NDUFB9Q9Y6M9 179 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 MUC19Q7Z5P9 8384 aa0.81□□□□□ -2.28
RNU6-542P-201ENST00000516405 NPEPPSL1A6NEC2 478 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 A6NJR5 290 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 CBX7O95931 251 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 ADH4P08319 380 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 SLFN14P0C7P3 912 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 ACRP10323 421 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 CD38P28907 300 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 TPP2P29144 1249 aaPredicted RBP0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 CCKBRP32239 447 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZNF200P98182 395 aaPredicted RBP0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 PCDH1Q08174 1060 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 RGL3Q3MIN7 710 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 BSPRYQ5W0U4 402 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 ULK2Q8IYT8 1036 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 RNF214Q8ND24 703 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 RIN3Q8TB24 985 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 PTPN18Q99952 460 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 G6PC3Q9BUM1 346 aa0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZC3H12CQ9C0D7 883 aaKnown RBP0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 DUSP15Q9H1R2 295 aaPredicted RBP0.8□□□□□ -2.28
RNU6-542P-201ENST00000516405 ARHGEF17Q96PE2 2063 aaPredicted RBP0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 A0A1W2PP55 124 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 NRDCO43847 1150 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 B4GALT3O60512 393 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 PNLIPP16233 465 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 PFKLP17858 780 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 PDE4DQ08499 809 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 KIAA2012Q0VF49 1180 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 FSTL1Q12841 308 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 KIR3DS1Q14943 382 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 PRKD1Q15139 912 aaPredicted RBP0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 DLK2Q6UY11 383 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 CACTINQ8WUQ7 758 aaKnown RBP0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 PRRX2Q99811 253 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 RIOX1Q9H6W3 641 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 ELP3Q9H9T3 547 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 LRP12Q9Y561 859 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 TRIOBPQ9H2D6 2365 aa0.79□□□□□ -2.28
RNU6-542P-201ENST00000516405 COL11A2P13942 1736 aaPredicted RBP0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 MROH6A6NGR9 719 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 NUDT19A8MXV4 375 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 TRIM38O00635 465 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 LZTS3O60299 673 aaPredicted RBP0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 LMNAP02545 664 aaKnown RBP0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 MPOP05164 745 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 CES1P23141 567 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 IRF5Q13568 498 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 RAB3GAP1Q15042 981 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 PRR16Q569H4 304 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 RUSC1-AS1Q66K80 236 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 MPRIPQ6WCQ1 1025 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 RPTNQ6XPR3 784 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 ADGRG3Q86Y34 549 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 MTMR14Q8NCE2 650 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 PLCD4Q9BRC7 762 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 CLEC4MQ9H2X3 399 aaPredicted RBP0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 GPBP1L1Q9HC44 474 aaPredicted RBP0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 NTMQ9P121 344 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 SLAIN2Q9P270 581 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 DUSP13Q9UII6 198 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 TPX2Q9ULW0 747 aaKnown RBP0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 ZNF281Q9Y2X9 895 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 PCDHA11Q9Y5I1 949 aa0.78□□□□□ -2.28
RNU6-542P-201ENST00000516405 USP2O75604 605 aaPredicted RBP0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 IGFBP4P22692 258 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 MC3RP41968 323 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 CBX2Q14781 532 aaPredicted RBP0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZC3H12AQ5D1E8 599 aaKnown RBP0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 COX20Q5RI15 118 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 BORAQ6PGQ7 559 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 ARMCX6Q7L4S7 300 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 RPUSD2Q8IZ73 545 aaKnown RBP0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 PIK3R5Q8WYR1 880 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 WBP1Q96G27 269 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 NOX5Q96PH1 765 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 PLEKHG4BQ96PX9 1271 aa0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.77□□□□□ -2.29
RNU6-542P-201ENST00000516405 CHRDQ9H2X0 955 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms