RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.31□□□□□ -1.4
CSTF1-207ENST00000498689 PCDHA11Q9Y5I1 949 aa6.31□□□□□ -1.4
CSTF1-207ENST00000498689 RALGAPA1Q6GYQ0 2036 aa6.3□□□□□ -1.4
CSTF1-207ENST00000498689 TRIP12Q14669 1992 aaPredicted RBP6.3□□□□□ -1.4
CSTF1-207ENST00000498689 DCDC2BA2VCK2 349 aa6.3□□□□□ -1.4
CSTF1-207ENST00000498689 ARP10275 920 aa6.3□□□□□ -1.4
CSTF1-207ENST00000498689 ATXN1P54253 815 aaKnown RBP6.3□□□□□ -1.4
CSTF1-207ENST00000498689 ZXDAP98168 799 aa6.3□□□□□ -1.4
CSTF1-207ENST00000498689 PPIGQ13427 754 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSTF1-207ENST00000498689 NEK9Q8TD19 979 aa6.3□□□□□ -1.4
CSTF1-207ENST00000498689 NUDT12Q9BQG2 462 aa6.3□□□□□ -1.4
CSTF1-207ENST00000498689 TBX21Q9UL17 535 aa6.3□□□□□ -1.4
CSTF1-207ENST00000498689 MYBBP1AQ9BQG0 1328 aaKnown RBP6.29□□□□□ -1.4
CSTF1-207ENST00000498689 CXCL11O14625 94 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 CCT4P50991 539 aaKnown RBP6.29□□□□□ -1.4
CSTF1-207ENST00000498689 TAP1Q03518 808 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 LRRC41Q15345 812 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 PSRC1Q6PGN9 363 aaPredicted RBP6.29□□□□□ -1.4
CSTF1-207ENST00000498689 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 MCM10Q7L590 875 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 DDX27Q96GQ7 796 aaKnown RBP6.29□□□□□ -1.4
CSTF1-207ENST00000498689 ZNF341Q9BYN7 854 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 UPF3BQ9BZI7 483 aaKnown RBP6.29□□□□□ -1.4
CSTF1-207ENST00000498689 PRKAG3Q9UGI9 489 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 SLC45A1Q9Y2W3 748 aa6.29□□□□□ -1.4
CSTF1-207ENST00000498689 LAMA1P25391 3075 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 APBB1O00213 710 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 CYP2C19P33261 490 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 PDIA6Q15084 440 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 PROX2Q3B8N5 592 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 MORN1Q5T089 497 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 PRR23BQ6ZRT6 265 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 FASTKD5Q7L8L6 764 aaKnown RBP6.28□□□□□ -1.4
CSTF1-207ENST00000498689 CCDC84Q86UT8 332 aaPredicted RBP6.28□□□□□ -1.4
CSTF1-207ENST00000498689 DZIP1LQ8IYY4 767 aaKnown RBP6.28□□□□□ -1.4
CSTF1-207ENST00000498689 TMEM105Q8N8V8 129 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 ARRDC4Q8NCT1 418 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 VWCEQ96DN2 955 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 PPP1R12CQ9BZL4 782 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 ZNF112Q9UJU3 913 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 AFG3L2Q9Y4W6 797 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 ZHX2Q9Y6X8 837 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 MYH13Q9UKX3 1938 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 MYO9AB2RTY4 2548 aa6.28□□□□□ -1.4
CSTF1-207ENST00000498689 MCM3APO60318 1980 aa6.27□□□□□ -1.4
CSTF1-207ENST00000498689 UTYO14607 1347 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 UMODL1Q5DID0 1318 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 CELSR3Q9NYQ7 3312 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 FGBP02675 491 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 SLURP2P0DP57 97 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 CYP2C18P33260 490 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 TNNI2P48788 182 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 DMWDQ09019 674 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 DCTN1Q14203 1278 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 KIAA0319Q5VV43 1072 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 MCTP2Q6DN12 878 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 TRMT44Q8IYL2 757 aaKnown RBP6.27□□□□□ -1.41
CSTF1-207ENST00000498689 ANKK1Q8NFD2 765 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 SIN3AQ96ST3 1273 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 APBA2Q99767 749 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 PORCNQ9H237 461 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 TXNRD2Q9NNW7 524 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 CD209Q9NNX6 404 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 IL23AQ9NPF7 189 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 MINPP1Q9UNW1 487 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 AGTPBP1Q9UPW5 1226 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 NDUFB9Q9Y6M9 179 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 SHROOM3Q8TF72 1996 aa6.27□□□□□ -1.41
CSTF1-207ENST00000498689 UBR5O95071 2799 aaPredicted RBP6.27□□□□□ -1.41
CSTF1-207ENST00000498689 A0A1W2PQ45 241 aaPredicted RBP6.26□□□□□ -1.41
CSTF1-207ENST00000498689 A0A1W2PQY0 241 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 TRIM75PA6NK02 468 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 SNAP23O00161 211 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 IRS4O14654 1257 aaPredicted RBP6.26□□□□□ -1.41
CSTF1-207ENST00000498689 MSCO60682 206 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 CYBAP13498 195 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 ATP2A2P16615 1042 aaKnown RBP6.26□□□□□ -1.41
CSTF1-207ENST00000498689 RGS2P41220 211 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 RING1Q06587 406 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 SIGLEC14Q08ET2 396 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 AIMP1Q12904 312 aaKnown RBP6.26□□□□□ -1.41
CSTF1-207ENST00000498689 MAP2K5Q13163 448 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 CLUL1Q15846 466 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 GRIK5Q16478 980 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 Q3C1V9 767 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 PUS10Q3MIT2 529 aaKnown RBP6.26□□□□□ -1.41
CSTF1-207ENST00000498689 FAM47AQ5JRC9 791 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 NOL9Q5SY16 702 aaKnown RBP6.26□□□□□ -1.41
CSTF1-207ENST00000498689 COPS6Q7L5N1 327 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 ANKRD33Q7Z3H0 272 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 KCNG4Q8TDN1 519 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 SOCS4Q8WXH5 440 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 ZMIZ1Q9ULJ6 1067 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 PHF24Q9UPV7 400 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 PCDHGC5Q9Y5F6 944 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 TANC1Q9C0D5 1861 aa6.26□□□□□ -1.41
CSTF1-207ENST00000498689 PPP1R3GB7ZBB8 358 aa6.25□□□□□ -1.41
CSTF1-207ENST00000498689 ATP5J2-PTCD1G3V325 749 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms