RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 CYB5R4Q7L1T6 521 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 LUZP1Q86V48 1076 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 MICU3Q86XE3 530 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 ERCC4Q92889 916 aaPredicted RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 AIFM3Q96NN9 605 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 CCDC39Q9UFE4 941 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 NOL7Q9UMY1 257 aaKnown RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 KIF20AO95235 890 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 ME1P48163 572 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 MAP3K12Q12852 859 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 SPC24Q8NBT2 197 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 ERO1AQ96HE7 468 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 C8orf76Q96K31 380 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 TTC12Q9H892 705 aaPredicted RBP8.13□□□□□ -1.11
HERC4-211ENST00000492996 LRP2BPQ9P2M1 347 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 HPS5Q9UPZ3 1129 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 TMEM265A0A087WTH1 108 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 AP5Z1O43299 807 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 GYG1P46976 350 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 CHRNDQ07001 517 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 ARHGEF6Q15052 776 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 UBE3CQ15386 1083 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 SUPT20HL1Q3ZLR7 823 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 NAA16Q6N069 864 aaPredicted RBP8.13□□□□□ -1.11
HERC4-211ENST00000492996 NFXL1Q6ZNB6 911 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 STRBPQ96SI9 672 aaKnown RBP8.13□□□□□ -1.11
HERC4-211ENST00000492996 NAPBQ9H115 298 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 ZKSCAN5Q9Y2L8 839 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 OFD1O75665 1012 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 ANO6Q4KMQ2 910 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 PRPF38BQ5VTL8 546 aaKnown RBP8.13□□□□□ -1.11
HERC4-211ENST00000492996 IFNL1Q8IU54 200 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 CCAR1Q8IX12 1150 aaKnown RBP8.13□□□□□ -1.11
HERC4-211ENST00000492996 CCDC82Q8N4S0 544 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
HERC4-211ENST00000492996 PHKBQ93100 1093 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 CSRNP1Q96S65 589 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 ZKSCAN3Q9BRR0 538 aa8.13□□□□□ -1.11
HERC4-211ENST00000492996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
HERC4-211ENST00000492996 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 PHF20L1A8MW92 1017 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 UVSSAQ2YD98 709 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 ZNF771Q7L3S4 317 aaPredicted RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 ARMC9Q7Z3E5 817 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 PRRT2Q7Z6L0 340 aaPredicted RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 FAM151AQ8WW52 585 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 EPB41L4AQ9HCS5 686 aaPredicted RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 MRVI1Q9Y6F6 885 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 NEDD4P46934 1319 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 TDO2P48775 406 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 IFNL3Q8IZI9 196 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 C17orf53Q8N3J3 647 aaPredicted RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 LCORLQ8N3X6 602 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 WDR66Q8TBY9 1149 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 DCPSQ96C86 337 aaKnown RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 DNAJC25Q9H1X3 360 aa8.12□□□□□ -1.11
HERC4-211ENST00000492996 DDX19AQ9NUU7 478 aaKnown RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
HERC4-211ENST00000492996 UBE2Q2LH0YL09 131 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 SMIM22K7EJ46 135 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 WNT10BO00744 389 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 DHX16O60231 1041 aaKnown RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 USP2O75604 605 aaPredicted RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 ZSCAN20P17040 1043 aaPredicted RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 HOXA7P31268 230 aaPredicted RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 SF3A1Q15459 793 aaKnown RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 HS1BP3Q53T59 392 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 SASS6Q6UVJ0 657 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 GOLPH3LQ9H4A5 285 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 CLSTN2Q9H4D0 955 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 RAI14Q9P0K7 980 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 SLC4A4Q9Y6R1 1079 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 MINDY4BA8MYZ0 360 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 METAP2P50579 478 aaKnown RBP eCLIP8.11□□□□□ -1.11
HERC4-211ENST00000492996 GTF2A2P52657 109 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 TMEM67Q5HYA8 995 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 C17orf99Q6UX52 265 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 CCDC73Q6ZRK6 1079 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 VPS37DQ86XT2 251 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 CERS5Q8N5B7 392 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 FSIP1Q8NA03 581 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 ZNF396Q96N95 335 aaPredicted RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 CCDC94Q9BW85 323 aaPredicted RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 GTPBP4Q9BZE4 634 aaKnown RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 GPR75-ASB3A0A0A6YYF3 556 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 IFIT3O14879 490 aaKnown RBP8.11□□□□□ -1.11
HERC4-211ENST00000492996 BCRP11274 1271 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 CYP7A1P22680 504 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 CDC27P30260 824 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 STK38Q15208 465 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 SDR42E1Q8WUS8 393 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 RCOR1Q9UKL0 485 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 JAG2Q9Y219 1238 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 CLIC4Q9Y696 253 aa8.11□□□□□ -1.11
HERC4-211ENST00000492996 A0A1B0GVL5 298 aa8.1□□□□□ -1.11
HERC4-211ENST00000492996 GSG1L2A8MUP6 293 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms