RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MKRN2Q9H000 416 aaKnown RBP7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 SUSD2Q9UGT4 822 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 LEMD3Q9Y2U8 911 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 SBNO2Q9Y2G9 1366 aa7.29□□□□□ -1.24
PRPF38A-203ENST00000487160 ESYT3A0FGR9 886 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 FAM181BA6NEQ2 426 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 DHX15O43143 795 aaKnown RBP7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 LEFTY1O75610 366 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 EOMESO95936 686 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 EPHX1P07099 455 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 SV2CQ496J9 727 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 CLEC10AQ8IUN9 316 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 SMARCC1Q92922 1105 aaPredicted RBP7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 DCAF5Q96JK2 942 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 FGD4Q96M96 766 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 HAUS7Q99871 368 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 EPN3Q9H201 632 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 FANCLQ9NW38 375 aa7.28□□□□□ -1.24
PRPF38A-203ENST00000487160 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.24
PRPF38A-203ENST00000487160 ANKRD34BA5PLL1 514 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 ENPP3O14638 875 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 CBFA2T2O43439 604 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 ETV3P41162 512 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 SQSTM1Q13501 440 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 ANKRD39Q53RE8 183 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 C2orf27AQ580R0 203 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 JMYQ8N9B5 988 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 THAP3Q8WTV1 239 aaPredicted RBP7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 APBA2Q99767 749 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 DUSP23Q9BVJ7 150 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 SPATA9Q9BWV2 254 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 KLHL25Q9H0H3 589 aa7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 TPX2Q9ULW0 747 aaKnown RBP7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
PRPF38A-203ENST00000487160 LRRN2O75325 713 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 FAM153BP0C7A2 387 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 NAT2P11245 290 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 ZNF143P52747 638 aaPredicted RBP7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 RNF4P78317 190 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 AUHQ13825 339 aaKnown RBP7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 C7orf61Q8IZ16 206 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 RNF141Q8WVD5 230 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 PPP1R14AQ96A00 147 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 FBXL18Q96ME1 805 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 FAM83CQ9BQN1 747 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 APEX2Q9UBZ4 518 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 ZNF451Q9Y4E5 1061 aa7.26□□□□□ -1.25
PRPF38A-203ENST00000487160 ANKRD62A6NC57 917 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 IQCA1LA6NCM1 817 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 SHOXO15266 292 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 CLSTN1O94985 981 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 FAM87AP0C7U9 286 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 ADAT2Q7Z6V5 191 aaKnown RBP7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 LRRC47Q8N1G4 583 aaKnown RBP7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 ZNF513Q8N8E2 541 aaPredicted RBP7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 GIMAP7Q8NHV1 300 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 APPBP2Q92624 585 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 ASPNQ9BXN1 380 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 CWC22Q9HCG8 908 aaKnown RBP7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 TMEM260Q9NX78 707 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 LRP2BPQ9P2M1 347 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 PTCH2Q9Y6C5 1203 aa7.25□□□□□ -1.25
PRPF38A-203ENST00000487160 HMX2A2RU54 273 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 RNF225M0QZC1 329 aaPredicted RBP7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 AGRPO00253 132 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 CDC45O75419 566 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 CD247P20963 164 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 CYP7A1P22680 504 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 ADMP35318 185 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 NBPF9Q3BBW0 867 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 PLEKHG4Q58EX7 1191 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 HOMER1Q86YM7 354 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 SHISA5Q8N114 240 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 LRRN4CLQ8ND94 238 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 GATA6Q92908 595 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 TP53INP1Q96A56 240 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 SGSM3Q96HU1 749 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 TBC1D32Q96NH3 1257 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 LGR4Q9BXB1 951 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 GBP3Q9H0R5 595 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 STOML1Q9UBI4 398 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 FBXL21Q9UKT6 434 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 RAXQ9Y2V3 346 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 SUGT1Q9Y2Z0 365 aa7.24□□□□□ -1.25
PRPF38A-203ENST00000487160 A0A1W2PQU0 124 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 ADCY3O60266 1144 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 GATA4P43694 442 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 SNW1Q13573 536 aaKnown RBP7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 OGFOD3Q6PK18 319 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 FAM214BQ7L5A3 538 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 ZBTB38Q8NAP3 1195 aaPredicted RBP7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 C7orf69Q9H7B7 122 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 GP6Q9HCN6 339 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 PCDHB12Q9Y5F1 795 aa7.23□□□□□ -1.25
PRPF38A-203ENST00000487160 PPM1BO75688 479 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 CBX7O95931 251 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 ITGAVP06756 1048 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 SFRP5Q5T4F7 317 aa7.22□□□□□ -1.25
PRPF38A-203ENST00000487160 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms