RNA–Protein interactions for RNA: ENST00000485136.5

CNOT10-217, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 608 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-217ENST00000485136 KREMEN1Q96MU8 473 aa9.43□□□□□ -0.9
CNOT10-217ENST00000485136 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
CNOT10-217ENST00000485136 PFDN2Q9UHV9 154 aa9.43□□□□□ -0.9
CNOT10-217ENST00000485136 CECR2Q9BXF3 1484 aa9.42□□□□□ -0.9
CNOT10-217ENST00000485136 AXDND1Q5T1B0 1012 aaPredicted RBP9.42□□□□□ -0.9
CNOT10-217ENST00000485136 NBPF12Q5TAG4 269 aaPredicted RBP9.42□□□□□ -0.9
CNOT10-217ENST00000485136 CLEC10AQ8IUN9 316 aa9.42□□□□□ -0.9
CNOT10-217ENST00000485136 SH3TC2Q8TF17 1288 aa9.42□□□□□ -0.9
CNOT10-217ENST00000485136 ZNF669Q96BR6 464 aaPredicted RBP9.42□□□□□ -0.9
CNOT10-217ENST00000485136 HAUS7Q99871 368 aa9.42□□□□□ -0.9
CNOT10-217ENST00000485136 EPN3Q9H201 632 aa9.42□□□□□ -0.9
CNOT10-217ENST00000485136 ZMYM5Q9UJ78 669 aa9.42□□□□□ -0.9
CNOT10-217ENST00000485136 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
CNOT10-217ENST00000485136 NAT2P11245 290 aa9.41□□□□□ -0.9
CNOT10-217ENST00000485136 ZNF143P52747 638 aaPredicted RBP9.41□□□□□ -0.9
CNOT10-217ENST00000485136 SSRP1Q08945 709 aaKnown RBP9.41□□□□□ -0.9
CNOT10-217ENST00000485136 SLC10A6Q3KNW5 377 aa9.41□□□□□ -0.9
CNOT10-217ENST00000485136 GIMAP7Q8NHV1 300 aa9.41□□□□□ -0.9
CNOT10-217ENST00000485136 RNF141Q8WVD5 230 aa9.41□□□□□ -0.9
CNOT10-217ENST00000485136 FAM83CQ9BQN1 747 aa9.41□□□□□ -0.9
CNOT10-217ENST00000485136 DUSP23Q9BVJ7 150 aa9.41□□□□□ -0.9
CNOT10-217ENST00000485136 KDM2BQ8NHM5 1336 aa9.4□□□□□ -0.9
CNOT10-217ENST00000485136 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.9
CNOT10-217ENST00000485136 DCAF15Q66K64 600 aa9.4□□□□□ -0.9
CNOT10-217ENST00000485136 HEATR6Q6AI08 1181 aaKnown RBP9.4□□□□□ -0.9
CNOT10-217ENST00000485136 TMEM151AQ8N4L1 468 aa9.4□□□□□ -0.9
CNOT10-217ENST00000485136 VWCEQ96DN2 955 aa9.4□□□□□ -0.9
CNOT10-217ENST00000485136 ASPNQ9BXN1 380 aa9.4□□□□□ -0.9
CNOT10-217ENST00000485136 SUSD2Q9UGT4 822 aa9.4□□□□□ -0.9
CNOT10-217ENST00000485136 TPX2Q9ULW0 747 aaKnown RBP9.4□□□□□ -0.9
CNOT10-217ENST00000485136 ANKRD34BA5PLL1 514 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 LEFTY1O75610 366 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 EOMESO95936 686 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 EPHX1P07099 455 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 FAM87AP0C7U9 286 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 GATA4P43694 442 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 TP53INP1Q96A56 240 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 KANSL2Q9H9L4 492 aa9.39□□□□□ -0.91
CNOT10-217ENST00000485136 ENPP3O14638 875 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 CBFA2T2O43439 604 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 CYP7A1P22680 504 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 TCEAL1Q15170 157 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 SV2CQ496J9 727 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 C2orf27AQ580R0 203 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
CNOT10-217ENST00000485136 FBXL18Q96ME1 805 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 APBA2Q99767 749 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 KLHL25Q9H0H3 589 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 C7orf69Q9H7B7 122 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 RAXQ9Y2V3 346 aa9.38□□□□□ -0.91
CNOT10-217ENST00000485136 HMX2A2RU54 273 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 IQCA1LA6NCM1 817 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 AGRPO00253 132 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 HSD3B2P26439 372 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 AUHQ13825 339 aaKnown RBP9.37□□□□□ -0.91
CNOT10-217ENST00000485136 EGFLAMQ63HQ2 1017 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 C7orf61Q8IZ16 206 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 FGD4Q96M96 766 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 TBC1D32Q96NH3 1257 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 SPATA9Q9BWV2 254 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 GBP3Q9H0R5 595 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 PRDM5Q9NQX1 630 aaPredicted RBP9.37□□□□□ -0.91
CNOT10-217ENST00000485136 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 ZNF451Q9Y4E5 1061 aa9.37□□□□□ -0.91
CNOT10-217ENST00000485136 SHOXO15266 292 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 GDF11O95390 407 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 RASSF7Q02833 373 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 ZAR1Q86SH2 424 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
CNOT10-217ENST00000485136 JMYQ8N9B5 988 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 GATA6Q92908 595 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 COX4I2Q96KJ9 171 aa9.36□□□□□ -0.91
CNOT10-217ENST00000485136 ESYT3A0FGR9 886 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 CDC45O75419 566 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 CD247P20963 164 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 ADMP35318 185 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 GSK3AP49840 483 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 SQSTM1Q13501 440 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 SFRP5Q5T4F7 317 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 ADAT2Q7Z6V5 191 aaKnown RBP9.35□□□□□ -0.91
CNOT10-217ENST00000485136 PPP1R14AQ96A00 147 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 FANCLQ9NW38 375 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 WHRNQ9P202 907 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 APEX2Q9UBZ4 518 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 FBXL21Q9UKT6 434 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 LEMD3Q9Y2U8 911 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 PCDHB12Q9Y5F1 795 aa9.35□□□□□ -0.91
CNOT10-217ENST00000485136 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 LRRN2O75325 713 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 CLSTN1O94985 981 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 NBPF9Q3BBW0 867 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 OGFOD3Q6PK18 319 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 PRR23CQ6ZRP0 262 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 HOMER1Q86YM7 354 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 APPBP2Q92624 585 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 SGSM3Q96HU1 749 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 GP6Q9HCN6 339 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
CNOT10-217ENST00000485136 LRP2BPQ9P2M1 347 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms