RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SOWAHDA6NJG2 315 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 SRGAP3O43295 1099 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 INHAP05111 366 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 RPS8P62241 208 aaKnown RBP7.62□□□□□ -1.19
SF3B1-209ENST00000479532 CCDC93Q567U6 631 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 RPAP2Q8IXW5 612 aaPredicted RBP7.62□□□□□ -1.19
SF3B1-209ENST00000479532 CRBNQ96SW2 442 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 CNNM1Q9NRU3 951 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 RAB6BQ9NRW1 208 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 GGA1Q9UJY5 639 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 SLX4Q8IY92 1834 aa7.62□□□□□ -1.19
SF3B1-209ENST00000479532 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 ABL1P00519 1130 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 GNRH1P01148 92 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 KCNA3P22001 575 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 ATP8B2P98198 1209 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 MTX1Q13505 466 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 EPHA10Q5JZY3 1008 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 LDHAL6AQ6ZMR3 332 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 SLCO4C1Q6ZQN7 724 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 SP8Q8IXZ3 490 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 RTKN2Q8IZC4 609 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 ANKRD44Q8N8A2 993 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 SUPT20HQ8NEM7 779 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 FOXD4L4Q8WXT5 416 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-209ENST00000479532 CELF1Q92879 486 aaKnown RBP7.61□□□□□ -1.19
SF3B1-209ENST00000479532 ANKRD2Q9GZV1 360 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 ARHGEF10LQ9HCE6 1279 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 SEC31BQ9NQW1 1179 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 ZBTB40Q9NUA8 1239 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 BSDC1Q9NW68 430 aaPredicted RBP7.61□□□□□ -1.19
SF3B1-209ENST00000479532 WWC3Q9ULE0 1092 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 ATP6V0A2Q9Y487 856 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 TAF1P21675 1872 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 LRRC37AA6NMS7 1700 aa7.61□□□□□ -1.19
SF3B1-209ENST00000479532 MROH5Q6ZUA9 1318 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 C21orf2O43822 256 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 IGFBP4P22692 258 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 KCNJ4P48050 445 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 EPHA4P54764 986 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 G3BP1Q13283 466 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3B1-209ENST00000479532 OS9Q13438 667 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-209ENST00000479532 HSP90AB4PQ58FF6 505 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 WDR44Q5JSH3 913 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 CEP85Q6P2H3 762 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 SCG3Q8WXD2 468 aaKnown RBP7.6□□□□□ -1.19
SF3B1-209ENST00000479532 KAZALD1Q96I82 304 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 SEPT3Q9UH03 358 aa7.6□□□□□ -1.19
SF3B1-209ENST00000479532 XDHP47989 1333 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 CIAO1O76071 339 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 ZNF211Q13398 564 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-209ENST00000479532 METTL24Q5JXM2 366 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 NKAPLQ5M9Q1 402 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 DPP8Q6V1X1 898 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-209ENST00000479532 CAPN12Q6ZSI9 719 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 ARHGAP27Q6ZUM4 889 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 EYA3Q99504 573 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 TSPAN10Q9H1Z9 355 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-209ENST00000479532 GPAMQ9HCL2 828 aa7.59□□□□□ -1.19
SF3B1-209ENST00000479532 FER1L6Q2WGJ9 1857 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 PNMA6EA0A0J9YXQ4 647 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 EYA2O00167 538 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 EPXP11678 715 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 IL15P40933 162 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-209ENST00000479532 DGKGP49619 791 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 IRX6P78412 446 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-209ENST00000479532 FKBP4Q02790 459 aaKnown RBP eCLIP7.58□□□□□ -1.2
SF3B1-209ENST00000479532 PTPN12Q05209 780 aaKnown RBP7.58□□□□□ -1.2
SF3B1-209ENST00000479532 CHRNDQ07001 517 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 ERC1Q8IUD2 1116 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 EXOC6Q8TAG9 804 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 SSH3Q8TE77 659 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 PSMD1Q99460 953 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 GRIP2Q9C0E4 1043 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 SIL1Q9H173 461 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 VPS33BQ9H267 617 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 TAOK3Q9H2K8 898 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 ANO2Q9NQ90 1003 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 COPRSQ9NQ92 184 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 BIN2Q9UBW5 565 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-209ENST00000479532 LEMD3Q9Y2U8 911 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 A0A1B0GUL6 1792 aa7.58□□□□□ -1.2
SF3B1-209ENST00000479532 LTBP3Q9NS15 1303 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 H3BRB1 525 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 DYRK3O43781 588 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 RAB11FIP3O75154 756 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 SURF6O75683 361 aaKnown RBP7.57□□□□□ -1.2
SF3B1-209ENST00000479532 UFL1O94874 794 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 IL2RAP01589 272 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 RFX5P48382 616 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-209ENST00000479532 GPSM2P81274 684 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 PRSS36Q5K4E3 855 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 TBCELQ5QJ74 424 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 KLHDC4Q8TBB5 520 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 GTF3C2Q8WUA4 911 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-209ENST00000479532 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 RWDD1Q9H446 243 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-209ENST00000479532 TUT1Q9H6E5 874 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms