RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 ADORA2AP29274 412 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 ADORA1P30542 326 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 USP14P54578 494 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 ATF7IPQ6VMQ6 1270 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 SLC44A5Q8NCS7 719 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 SNX27Q96L92 541 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.3□□□□□ -1.08
LSAMP-204ENST00000475403 SLC28A3Q9HAS3 691 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 STARD7Q9NQZ5 370 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 PHF24Q9UPV7 400 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 BDP1A6H8Y1 2624 aa8.3□□□□□ -1.08
LSAMP-204ENST00000475403 PIEZO1Q92508 2521 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 A0A1W2PQ45 241 aaPredicted RBP8.29□□□□□ -1.08
LSAMP-204ENST00000475403 A0A1W2PQY0 241 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 GRXCR1A8MXD5 290 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 CNMDO75829 334 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 CIAO1O76071 339 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 BAG3O95817 575 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 PLCG2P16885 1265 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 IL15P40933 162 aaPredicted RBP8.29□□□□□ -1.08
LSAMP-204ENST00000475403 KCNQ1P51787 676 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 TFF2Q03403 129 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 ADGRE1Q14246 886 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 RAB3GAP1Q15042 981 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 GORABQ5T7V8 394 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 PSRC1Q6PGN9 363 aaPredicted RBP8.29□□□□□ -1.08
LSAMP-204ENST00000475403 ATG9AQ7Z3C6 839 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 TMEM199Q8N511 208 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 SH3RF3Q8TEJ3 882 aaPredicted RBP8.29□□□□□ -1.08
LSAMP-204ENST00000475403 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 NKX2-4Q9H2Z4 354 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 EPHX3Q9H6B9 360 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 MRS2Q9HD23 443 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 EMILIN3Q9NT22 766 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 FBXO3Q9UK99 471 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 XIRP2A4UGR9 3374 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 ZNF236Q9UL36 1845 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 MROH7Q68CQ1 1323 aa8.29□□□□□ -1.08
LSAMP-204ENST00000475403 FAM86C2PA6NEL3 165 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 STRNO43815 780 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 GTPBP6O43824 516 aaPredicted RBP8.28□□□□□ -1.08
LSAMP-204ENST00000475403 PGK1P00558 417 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 TIMP1P01033 207 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 GH2P01242 217 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 TPM2P07951 284 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 BMP1P13497 986 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 VCAM1P19320 739 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 PLS1Q14651 629 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 MVPQ14764 893 aaKnown RBP8.28□□□□□ -1.08
LSAMP-204ENST00000475403 SHROOM1Q2M3G4 852 aaPredicted RBP8.28□□□□□ -1.08
LSAMP-204ENST00000475403 PRAMEF19Q5SWL8 479 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 CATSPERGQ6ZRH7 1159 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 MAPKAPK5Q8IW41 473 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 RPAP3Q9H6T3 665 aaPredicted RBP8.28□□□□□ -1.08
LSAMP-204ENST00000475403 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
LSAMP-204ENST00000475403 BTBD7Q9P203 1132 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 LRP2BPQ9P2M1 347 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 MUC6Q6W4X9 2439 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 FLT1P17948 1338 aa8.28□□□□□ -1.08
LSAMP-204ENST00000475403 SIPA1L1O43166 1804 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
LSAMP-204ENST00000475403 ACRP10323 421 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 RFX5P48382 616 aaPredicted RBP8.27□□□□□ -1.09
LSAMP-204ENST00000475403 FAAP100Q0VG06 881 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 TMEM240Q5SV17 173 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 MFSD5Q6N075 450 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 ANKRD33Q7Z3H0 272 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 FOXP4Q8IVH2 680 aaPredicted RBP8.27□□□□□ -1.09
LSAMP-204ENST00000475403 WDR63Q8IWG1 891 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 TGFBRAP1Q8WUH2 860 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 HERVK_113Q902F9 699 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 NSUN4Q96CB9 384 aaKnown RBP8.27□□□□□ -1.09
LSAMP-204ENST00000475403 TOX2Q96NM4 488 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 TANGO6Q9C0B7 1094 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 DNAJC18Q9H819 358 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 SAP30BPQ9UHR5 308 aaKnown RBP8.27□□□□□ -1.09
LSAMP-204ENST00000475403 AKAP2Q9Y2D5 859 aa8.27□□□□□ -1.09
LSAMP-204ENST00000475403 A0A1B0GUL7 405 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 ERC2O15083 957 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 TLR3O15455 904 aaKnown RBP8.26□□□□□ -1.09
LSAMP-204ENST00000475403 GPR37L1O60883 481 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 UBTFL1P0CB47 393 aaPredicted RBP8.26□□□□□ -1.09
LSAMP-204ENST00000475403 AKR1A1P14550 325 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 CSF2RAP15509 400 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 ERCC3P19447 782 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 MRE11P49959 708 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 RRP1P56182 461 aaKnown RBP8.26□□□□□ -1.09
LSAMP-204ENST00000475403 TIMM10P62072 90 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 JAG1P78504 1218 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 NAA16Q6N069 864 aaPredicted RBP8.26□□□□□ -1.09
LSAMP-204ENST00000475403 SAMD1Q6SPF0 538 aaPredicted RBP8.26□□□□□ -1.09
LSAMP-204ENST00000475403 LBX2Q6XYB7 198 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 TBC1D9Q6ZT07 1266 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 ZNF365Q70YC5 407 aa8.26□□□□□ -1.09
LSAMP-204ENST00000475403 SPATA5Q8NB90 893 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms