RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 GMCL1Q96IK5 515 aa18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 WNK4Q96J92 1243 aa18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 UPF3BQ9BZI7 483 aaKnown RBP18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 VCPKMTQ9H867 229 aa18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 KAT14Q9H8E8 782 aa18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 GOPCQ9HD26 462 aa18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
PCOLCE-205ENST00000472348 A0A0G2JLL6 359 aaPredicted RBP18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 PLA2G6O60733 806 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 SPRYD7Q5W111 196 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 USP17L2Q6R6M4 530 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 PRRT2Q7Z6L0 340 aaPredicted RBP18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 JMYQ8N9B5 988 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 PNMA1Q8ND90 353 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 CLMNQ96JQ2 1002 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 ZKSCAN3Q9BRR0 538 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 ELP3Q9H9T3 547 aa18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
PCOLCE-205ENST00000472348 A0A1W2PRG0 241 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 TESPA1A2RU30 521 aaPredicted RBP18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 CCDC69A6NI79 296 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 IRF6O14896 467 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 NMT2O60551 498 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 SLC10A3P09131 477 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 SMARCA1P28370 1054 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 GTF2A2P52657 109 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 FGD1P98174 961 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 TROAPQ12815 778 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 SPP2Q13103 211 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 SNAPC2Q13487 334 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 TOB2Q14106 344 aaPredicted RBP18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 SYNE3Q6ZMZ3 975 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 FASTKD5Q7L8L6 764 aaKnown RBP18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 DCAF4Q8WV16 495 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 SNX21Q969T3 373 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 SLC45A1Q9Y2W3 748 aa18.79■□□□□ 0.6
PCOLCE-205ENST00000472348 F5H6K3 240 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 WDR46O15213 610 aaKnown RBP18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 ECE1P42892 770 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 VEGFBP49765 207 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 ZNF157P51786 506 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 KLRC3Q07444 240 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 COL9A3Q14050 684 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 DEFB115Q30KQ5 88 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 APOA5Q6Q788 366 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 PAXIP1Q6ZW49 1069 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 CHST3Q7LGC8 479 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 CATIPQ7Z7H3 387 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 RASAL3Q86YV0 1011 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 ZSCAN31Q96LW9 406 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 SLC12A7Q9Y666 1083 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 PARP14Q460N5 1801 aa18.78■□□□□ 0.6
PCOLCE-205ENST00000472348 MANSC4A6NHS7 340 aaPredicted RBP18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 CETPP11597 493 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 AK2P54819 239 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 GRM1Q13255 1194 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 ZNF654Q8IZM8 581 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 ACER1Q8TDN7 264 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 BRF1Q92994 677 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 OTUD5Q96G74 571 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 FEZ1Q99689 392 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 LIMCH1Q9UPQ0 1083 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 THSD7BQ9C0I4 1608 aa18.77■□□□□ 0.6
PCOLCE-205ENST00000472348 MYPNQ86TC9 1320 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 CCDC196A0A1B0GTZ2 297 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 FAM155AB1AL88 458 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 CPA1P15085 419 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 HOXA7P31268 230 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 KIF5BP33176 963 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 GNAQP50148 359 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 NOGQ13253 232 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 ASPRV1Q53RT3 343 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 MS4A4AQ96JQ5 239 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 LZTS2Q9BRK4 669 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 SH2B1Q9NRF2 756 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 TMOD4Q9NZQ9 345 aa18.76■□□□□ 0.59
PCOLCE-205ENST00000472348 FDX1P10109 184 aa18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 PDHBP11177 359 aa18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 GJA5P36382 358 aa18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 PABPC4Q13310 644 aaKnown RBP eCLIP18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 MTMR2Q13614 643 aa18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 CYP4F22Q6NT55 531 aa18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 NFXL1Q6ZNB6 911 aa18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 EMILIN3Q9NT22 766 aa18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 RBM28Q9NW13 759 aaKnown RBP18.75■□□□□ 0.59
PCOLCE-205ENST00000472348 TRIM75PA6NK02 468 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 ZBTB43O43298 467 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 NDUFB10O96000 172 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 GRM4Q14833 912 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 BTNL9Q6UXG8 535 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 CLEC10AQ8IUN9 316 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 TCEANC2Q96MN5 208 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 LRRC2Q9BYS8 371 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 RLFQ13129 1914 aa18.74■□□□□ 0.59
PCOLCE-205ENST00000472348 KLF18A0A0U1RQI7 1052 aa18.73■□□□□ 0.59
PCOLCE-205ENST00000472348 PALM3A6NDB9 673 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms