RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SRBD1Q8N5C6 995 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 TC2NQ8N9U0 490 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 CTCFLQ8NI51 663 aaPredicted RBP14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 ZNF592Q92610 1267 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 PAGE5Q96GU1 130 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 PANX2Q96RD6 677 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 TCP11L1Q9NUJ3 509 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 DDX60LQ5H9U9 1706 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 TNRC6CQ9HCJ0 1690 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 CALML3P27482 149 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 TM4SF1P30408 202 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 KIF5BP33176 963 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 USP49Q70CQ1 688 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 CERS3Q8IU89 383 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 CCDC82Q8N4S0 544 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 DAGLBQ8NCG7 672 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 CTAGE1Q96RT6 745 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.25□□□□□ -0.131e-7■■■■□ 23.8
ECHDC1-209ENST00000454591 ITIH6Q6UXX5 1313 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 CDK5RAP2Q96SN8 1893 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 CYP2D7A0A087X1C5 515 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 FAM205CA6NFA0 338 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 LRRC10BA6NIK2 292 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 SMIM22K7EJ46 135 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 PPP4CP60510 307 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 VPS72Q15906 364 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 GALNT17Q6IS24 598 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 SYT10Q6XYQ8 523 aa14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 SYMPKQ92797 1274 aaKnown RBP14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 NAA15Q9BXJ9 866 aaKnown RBP14.25□□□□□ -0.13
ECHDC1-209ENST00000454591 WTIPA6NIX2 430 aaPredicted RBP14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 PPP1R3GB7ZBB8 358 aa14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 H2AFXP16104 143 aaPredicted RBP14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 GNAQP50148 359 aa14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 TPTE2Q6XPS3 522 aa14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 SETDB2Q96T68 719 aa14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 BAG1Q99933 345 aaPredicted RBP14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 ADD3Q9UEY8 706 aaKnown RBP14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 DNAI1Q9UI46 699 aa14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 PPP2R2CQ9Y2T4 447 aa14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
ECHDC1-209ENST00000454591 VWA3AA6NCI4 1184 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 M0R2N6 131 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 GTPBP6O43824 516 aaPredicted RBP14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 CDK11BP21127 795 aaKnown RBP14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 LONP1P36776 959 aaKnown RBP14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 GRM4Q14833 912 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 C12orf60Q5U649 245 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 PDXDC2PQ6P474 469 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 C4orf32Q8N8J7 132 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 IQUBQ8NA54 791 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 WDR66Q8TBY9 1149 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 DHX58Q96C10 678 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 CCDC51Q96ER9 411 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 EPSTI1Q96J88 318 aa14.23□□□□□ -0.13
ECHDC1-209ENST00000454591 SYNRGQ9UMZ2 1314 aa14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 PRDM1O75626 825 aa14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 ZSCAN20P17040 1043 aaPredicted RBP14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 KLRK1P26718 216 aa14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 PTGDRQ13258 359 aa14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 NAA30Q147X3 362 aaPredicted RBP14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 PDILTQ8N807 584 aa14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 SAMSN1Q9NSI8 373 aaKnown RBP14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 LIMA1Q9UHB6 759 aaKnown RBP14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 XDHP47989 1333 aa14.22□□□□□ -0.13
ECHDC1-209ENST00000454591 WNT7AO00755 349 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 MYL1P05976 194 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 TPM1P09493 284 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 PRDX5P30044 214 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 FAM193AP78312 1265 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 GSTO1P78417 241 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 SPAG1Q07617 926 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 DMTNQ08495 405 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 ZNF827Q17R98 1081 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 KMT5BQ4FZB7 885 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 FOCADQ5VW36 1801 aa14.21□□□□□ -0.13
ECHDC1-209ENST00000454591 AKR1B15C9JRZ8 316 aaPredicted RBP14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 LAD1O00515 517 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 NLRP5P59047 1200 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 ZNF174Q15697 407 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 ELF2Q15723 593 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 HOMER1Q86YM7 354 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 BLIDQ8IZY5 108 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 LZTS2Q9BRK4 669 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 ZMYND15Q9H091 742 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 RMND1Q9NWS8 449 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 RWDD2AQ9UIY3 292 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 PCDHA4Q9UN74 947 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 PARP3Q9Y6F1 533 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 MYH1P12882 1939 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 TSPY2A6NKD2 308 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 EFCAB8A8MWE9 144 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 LDHCP07864 332 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 SMARCA1P28370 1054 aa14.2□□□□□ -0.14
ECHDC1-209ENST00000454591 PRPHP41219 470 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms