RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 AFG3L2Q9Y4W6 797 aa10.28□□□□□ -0.76
FXR1-203ENST00000445140 ZNF236Q9UL36 1845 aa10.28□□□□□ -0.76
FXR1-203ENST00000445140 STK36Q9NRP7 1315 aa10.27□□□□□ -0.76
FXR1-203ENST00000445140 RANBP6O60518 1105 aaKnown RBP10.27□□□□□ -0.77
FXR1-203ENST00000445140 ICA1Q05084 483 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 TROAPQ12815 778 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 TMEM67Q5HYA8 995 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 MAP1SQ66K74 1059 aaPredicted RBP10.27□□□□□ -0.77
FXR1-203ENST00000445140 APOA5Q6Q788 366 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 C2orf69Q8N8R5 385 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 PROCA1Q8NCQ7 364 aaPredicted RBP10.27□□□□□ -0.77
FXR1-203ENST00000445140 INTS4Q96HW7 963 aaKnown RBP10.27□□□□□ -0.77
FXR1-203ENST00000445140 WRNIP1Q96S55 665 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 PNMA2Q9UL42 364 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 IFIT3O14879 490 aaKnown RBP10.27□□□□□ -0.77
FXR1-203ENST00000445140 GH2P01242 217 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 FDX1P10109 184 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 AK2P54819 239 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 VGLL4Q14135 290 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 ASPRV1Q53RT3 343 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 Q6ZUG5 572 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 TMEM47Q9BQJ4 181 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 RBM27Q9P2N5 1060 aaKnown RBP10.27□□□□□ -0.77
FXR1-203ENST00000445140 CSADQ9Y600 493 aa10.27□□□□□ -0.77
FXR1-203ENST00000445140 A0A0G2JLL6 359 aaPredicted RBP10.26□□□□□ -0.77
FXR1-203ENST00000445140 GNAQP50148 359 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 NEK4P51957 841 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 JAG1P78504 1218 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 GPATCH4Q5T3I0 446 aaKnown RBP10.26□□□□□ -0.77
FXR1-203ENST00000445140 IFIT1BQ5T764 474 aaKnown RBP10.26□□□□□ -0.77
FXR1-203ENST00000445140 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 LBX2Q6XYB7 198 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 PRRT2Q7Z6L0 340 aaPredicted RBP10.26□□□□□ -0.77
FXR1-203ENST00000445140 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 PICK1Q9NRD5 415 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 CCDC196A0A1B0GTZ2 297 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 IRF6O14896 467 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 WDR46O15213 610 aaKnown RBP10.26□□□□□ -0.77
FXR1-203ENST00000445140 CST9Q5W186 159 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 ZNF280CQ8ND82 737 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 MTMR8Q96EF0 704 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 VCPKMTQ9H867 229 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 HPS5Q9UPZ3 1129 aa10.26□□□□□ -0.77
FXR1-203ENST00000445140 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
FXR1-203ENST00000445140 PRDM1O75626 825 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 SEPT2Q15019 361 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
FXR1-203ENST00000445140 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 hCG_1984214I3L0E3 225 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 DHX16O60231 1041 aaKnown RBP10.25□□□□□ -0.77
FXR1-203ENST00000445140 EEF2P13639 858 aaKnown RBP10.25□□□□□ -0.77
FXR1-203ENST00000445140 PDIA3P30101 505 aaKnown RBP10.25□□□□□ -0.77
FXR1-203ENST00000445140 INPP5BP32019 993 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 KIF5BP33176 963 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 BACE1P56817 501 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 FAM47AQ5JRC9 791 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 ZNF713Q8N859 430 aaPredicted RBP10.25□□□□□ -0.77
FXR1-203ENST00000445140 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 KAT14Q9H8E8 782 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 INCENPQ9NQS7 918 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
FXR1-203ENST00000445140 RASSF10A6NK89 507 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 K7ELQ4 463 aaPredicted RBP10.24□□□□□ -0.77
FXR1-203ENST00000445140 CELF2O95319 508 aaKnown RBP10.24□□□□□ -0.77
FXR1-203ENST00000445140 SLC10A3P09131 477 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 HOXA7P31268 230 aaPredicted RBP10.24□□□□□ -0.77
FXR1-203ENST00000445140 COL9A3Q14050 684 aaPredicted RBP10.24□□□□□ -0.77
FXR1-203ENST00000445140 FAM160B2Q86V87 743 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 WNK4Q96J92 1243 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 BRPF3Q9ULD4 1205 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 CCDC69A6NI79 296 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 TMEM88BA6NKF7 163 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 USP17L10C9JJH3 530 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 PDHBP11177 359 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 FUT2Q10981 343 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 MOGSQ13724 837 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 RRP12Q5JTH9 1297 aaKnown RBP10.24□□□□□ -0.77
FXR1-203ENST00000445140 MIGA2Q7L4E1 593 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 SAPCD2Q86UD0 394 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 SMARCC2Q8TAQ2 1214 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 BRF1Q92994 677 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 CFHR5Q9BXR6 569 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 UPF3BQ9BZI7 483 aaKnown RBP10.24□□□□□ -0.77
FXR1-203ENST00000445140 ADAMTS5Q9UNA0 930 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 SLC12A7Q9Y666 1083 aa10.24□□□□□ -0.77
FXR1-203ENST00000445140 TRAF5O00463 557 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 ZBTB43O43298 467 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 CDKL5O76039 1030 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 GDF11O95390 407 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 IFNAR1P17181 557 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 ZNF543Q08ER8 600 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 BECN1Q14457 450 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 CCDC102AQ96A19 550 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 TPCN1Q9ULQ1 816 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms