RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 GCM1Q9NP62 436 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 CEP131Q9UPN4 1083 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 SSU72P8A0A1W2PR75 194 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 WASH4PA8MWX3 477 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 PSPNO60542 156 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 CELA3AP09093 270 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 MAPK8P45983 427 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 YARSP54577 528 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 TMEM62Q0P6H9 643 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 TIGD5Q53EQ6 642 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 TXNDC2Q86VQ3 553 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 SIRT2Q8IXJ6 389 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 FEZF2Q8TBJ5 459 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 FAM8A1Q9UBU6 413 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 ZMYM5Q9UJ78 669 aa5.96□□□□□ -1.46
TRAPPC13-203ENST00000415825 N4BP3O15049 544 aa5.95□□□□□ -1.46
TRAPPC13-203ENST00000415825 MAPK1P28482 360 aa5.95□□□□□ -1.46
TRAPPC13-203ENST00000415825 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
TRAPPC13-203ENST00000415825 CNKSR3Q6P9H4 555 aa5.95□□□□□ -1.46
TRAPPC13-203ENST00000415825 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-203ENST00000415825 DTWD2Q8NBA8 298 aa5.95□□□□□ -1.46
TRAPPC13-203ENST00000415825 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
TRAPPC13-203ENST00000415825 SLC22A31A6NKX4 558 aa5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 PTPN11Q06124 597 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 RASIP1Q5U651 963 aa5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 DACT3Q96B18 629 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 Q96M66 194 aa5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 SP110Q9HB58 689 aa5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 LUC7LQ9NQ29 371 aaKnown RBP5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 TJP2Q9UDY2 1190 aa5.94□□□□□ -1.46
TRAPPC13-203ENST00000415825 ARL4AP40617 200 aa5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 RPS26P62854 115 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 MCATQ8IVS2 390 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 PANK1Q8TE04 598 aa5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 GAL3ST3Q96A11 431 aa5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 BDH2Q9BUT1 245 aa5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 MIR1-1HGQ9H1L0 117 aa5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 MBD1Q9UIS9 605 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 ADAM30Q9UKF2 790 aa5.93□□□□□ -1.46
TRAPPC13-203ENST00000415825 SOWAHDA6NJG2 315 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 TREHO43280 583 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 USP17L7P0C7H9 530 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 RPL10P27635 214 aaKnown RBP5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 DSC3Q14574 896 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 PUM1Q14671 1186 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 FRMD5Q7Z6J6 570 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 ZSCAN29Q8IWY8 852 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 NLGN1Q8N2Q7 840 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 CYB5D2Q8WUJ1 264 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 RNF141Q8WVD5 230 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 CRTAC1Q9NQ79 661 aa5.92□□□□□ -1.46
TRAPPC13-203ENST00000415825 INSRRP14616 1297 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 NFKB2Q00653 900 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 CCDC85BQ15834 202 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 VMACQ2NL98 169 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 FAM13CQ8NE31 585 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 DNAJB8Q8NHS0 232 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 OSBPL7Q9BZF2 842 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 C12orf49Q9H741 205 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 MYRFQ9Y2G1 1151 aa5.91□□□□□ -1.46
TRAPPC13-203ENST00000415825 MPOP05164 745 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 GALK1P51570 392 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 SEPT6Q14141 434 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 ZNF827Q17R98 1081 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 TSNAXIP1Q2TAA8 658 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 RNF111Q6ZNA4 994 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 CEP128Q6ZU80 1094 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 WAPLQ7Z5K2 1190 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 MZB1Q8WU39 189 aa5.9□□□□□ -1.46
TRAPPC13-203ENST00000415825 K7ESM1 405 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 GFRA2O00451 464 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 CILPO75339 1184 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 BPNT1O95861 308 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 VIPR1P32241 457 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 KIR2DL1P43626 348 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 KIR2DL2P43627 348 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 CDK8P49336 464 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 EPHB3P54753 998 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 TEKQ02763 1124 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 NLRX1Q86UT6 975 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 LINC01356Q8N9X3 169 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 PWWP2AQ96N64 755 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 FRMD6Q96NE9 622 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 ASPNQ9BXN1 380 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 ADAM7Q9H2U9 754 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 USP40Q9NVE5 1235 aa5.89□□□□□ -1.47
TRAPPC13-203ENST00000415825 USP2O75604 605 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-203ENST00000415825 PLCG1P19174 1290 aa5.88□□□□□ -1.47
TRAPPC13-203ENST00000415825 KCNC1P48547 511 aa5.88□□□□□ -1.47
TRAPPC13-203ENST00000415825 EFEMP1Q12805 493 aa5.88□□□□□ -1.47
TRAPPC13-203ENST00000415825 UBXN11Q5T124 520 aa5.88□□□□□ -1.47
TRAPPC13-203ENST00000415825 CNOT11Q9UKZ1 510 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-203ENST00000415825 NRDCO43847 1150 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 RLBP1P12271 317 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 PNLIPP16233 465 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 PCBP3P57721 371 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 SYT8Q8NBV8 401 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 ENOX1Q8TC92 643 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 LINC01599Q8WXQ3 324 aa5.87□□□□□ -1.47
TRAPPC13-203ENST00000415825 ACSF2Q96CM8 615 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms