RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 RAPGEF6Q8TEU7 1601 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 UFL1O94874 794 aa13.02□□□□□ -0.32
TMF1-201ENST00000398559 CCDC13Q8IYE1 715 aa13.02□□□□□ -0.32
TMF1-201ENST00000398559 PARP3Q9Y6F1 533 aa13.02□□□□□ -0.32
TMF1-201ENST00000398559 KRIT1O00522 736 aa13.02□□□□□ -0.32
TMF1-201ENST00000398559 HYOU1Q9Y4L1 999 aa13.02□□□□□ -0.32
TMF1-201ENST00000398559 PDE8AO60658 829 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 MAP7Q14244 749 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 OR8K1Q8NGG5 319 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 MICAL1Q8TDZ2 1067 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 ZNF215Q9UL58 517 aaPredicted RBP13.02□□□□□ -0.33
TMF1-201ENST00000398559 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 ZAP70P43403 619 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 ZYXQ15942 572 aaKnown RBP13.02□□□□□ -0.33
TMF1-201ENST00000398559 PTPROQ16827 1216 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 ABCB4P21439 1286 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 IQCDQ96DY2 449 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
TMF1-201ENST00000398559 GNA14O95837 355 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 GABPAQ06546 454 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 GRM1Q13255 1194 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 RDH13Q8NBN7 331 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 KLHL14Q9P2G3 628 aa13.02□□□□□ -0.33
TMF1-201ENST00000398559 PPP2R5BQ15173 497 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 PALM2Q8IXS6 379 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 P3H4Q92791 437 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 TRIM6Q9C030 488 aaPredicted RBP13.01□□□□□ -0.33
TMF1-201ENST00000398559 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
TMF1-201ENST00000398559 UHRF1BP1LA0JNW5 1464 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 KRT12Q99456 494 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 YTHDC2Q9H6S0 1430 aaKnown RBP13.01□□□□□ -0.33
TMF1-201ENST00000398559 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 SPATA5Q8NB90 893 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 DSCC1Q9BVC3 393 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 AFG3L2Q9Y4W6 797 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 KRT19P08727 400 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 LIG3P49916 1009 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 IP6K1Q92551 441 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 ARHGAP42A6NI28 874 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 LZTS2Q9BRK4 669 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
TMF1-201ENST00000398559 RABGAP1Q9Y3P9 1069 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
TMF1-201ENST00000398559 CD19P15391 556 aa13□□□□□ -0.33
TMF1-201ENST00000398559 GSDMBQ8TAX9 411 aa13□□□□□ -0.33
TMF1-201ENST00000398559 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
TMF1-201ENST00000398559 CTAGE3PQ8IX95 158 aa13□□□□□ -0.33
TMF1-201ENST00000398559 BCAS4Q8TDM0 211 aa13□□□□□ -0.33
TMF1-201ENST00000398559 DPH5Q9H2P9 285 aa13□□□□□ -0.33
TMF1-201ENST00000398559 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
TMF1-201ENST00000398559 IL13P35225 146 aa13□□□□□ -0.33
TMF1-201ENST00000398559 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
TMF1-201ENST00000398559 TTC19Q6DKK2 380 aaPredicted RBP13□□□□□ -0.33
TMF1-201ENST00000398559 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
TMF1-201ENST00000398559 ATP2A3Q93084 1043 aa13□□□□□ -0.33
TMF1-201ENST00000398559 NCKAP5LQ9HCH0 1330 aa13□□□□□ -0.33
TMF1-201ENST00000398559 GCP02774 474 aa13□□□□□ -0.33
TMF1-201ENST00000398559 GCKP35557 465 aa13□□□□□ -0.33
TMF1-201ENST00000398559 TM6SF1Q9BZW5 370 aa13□□□□□ -0.33
TMF1-201ENST00000398559 TFCP2L1Q9NZI6 479 aa13□□□□□ -0.33
TMF1-201ENST00000398559 TTLL3Q9Y4R7 772 aa13□□□□□ -0.33
TMF1-201ENST00000398559 BAG2O95816 211 aa13□□□□□ -0.33
TMF1-201ENST00000398559 BSPRYQ5W0U4 402 aa13□□□□□ -0.33
TMF1-201ENST00000398559 LPIN2Q92539 896 aa13□□□□□ -0.33
TMF1-201ENST00000398559 EPB41L3Q9Y2J2 1087 aaPredicted RBP13□□□□□ -0.33
TMF1-201ENST00000398559 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 OPHN1O60890 802 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
TMF1-201ENST00000398559 STAT1P42224 750 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 SLC1A4P43007 532 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 FAM71BQ8TC56 605 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 COL17A1Q9UMD9 1497 aaPredicted RBP12.99□□□□□ -0.33
TMF1-201ENST00000398559 HOMER3Q9NSC5 361 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 HIP1RO75146 1068 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 ADCY8P40145 1251 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 GOLGA5Q8TBA6 731 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 PPP4R1Q8TF05 950 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 JDP2Q8WYK2 163 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 HINFPQ9BQA5 517 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 PDE11AQ9HCR9 933 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 SESN3P58005 492 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 PTH1RQ03431 593 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 ADAT2Q7Z6V5 191 aaKnown RBP12.99□□□□□ -0.33
TMF1-201ENST00000398559 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
TMF1-201ENST00000398559 TPH2Q8IWU9 490 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 BCAP29Q9UHQ4 241 aa12.99□□□□□ -0.33
TMF1-201ENST00000398559 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
TMF1-201ENST00000398559 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
TMF1-201ENST00000398559 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
TMF1-201ENST00000398559 CYP2J2P51589 502 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms