RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 KDM2BQ8NHM5 1336 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 FBXO41Q8TF61 875 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 P3H4Q92791 437 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 ZBTB22O15209 634 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 MORC3Q14149 939 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 LRGUKQ96M69 825 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 FANCLQ9NW38 375 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 KAZNQ674X7 775 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 HAUS1Q96CS2 278 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 ARMT1Q9H993 441 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 AMOTL2Q9Y2J4 779 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 PFKFB1P16118 471 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 HSP90AA5PQ58FG0 334 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 ATP2A3Q93084 1043 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 CYTH2Q99418 400 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 CLCN6P51797 869 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 KLHL29Q96CT2 875 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 KRT10P13645 584 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 RPGRIP1Q96KN7 1286 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 PDHA1P08559 390 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 HIBCHQ6NVY1 386 aaPredicted RBP18.11■□□□□ 0.49
SMAD3-201ENST00000327367 NLRP7Q8WX94 980 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 KCNV2Q8TDN2 545 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 THOC1Q96FV9 657 aaKnown RBP18.11■□□□□ 0.49
SMAD3-201ENST00000327367 SLCO1A2P46721 670 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 KSR2Q6VAB6 950 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 NUDCD3Q8IVD9 361 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 SNX29Q8TEQ0 813 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 EEF2KMTQ96G04 330 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 DYDC2Q96IM9 177 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 YY1AP1Q9H869 796 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 ZC4H2Q9NQZ6 224 aa18.11■□□□□ 0.49
SMAD3-201ENST00000327367 SART1O43290 800 aaKnown RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 MAP3K7O43318 606 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 CXCR5P32302 372 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 SLC12A2P55011 1212 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 SRGAP1Q7Z6B7 1085 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 CMTR1Q8N1G2 835 aaKnown RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 MYCT1Q8N699 235 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 ZNF449Q6P9G9 518 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 PPWD1Q96BP3 646 aaKnown RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 EEF1GP26641 437 aaKnown RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 ME3Q16798 604 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 KRT40Q6A162 431 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 PRDM1O75626 825 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 FOXD4Q12950 439 aaPredicted RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 TBC1D1Q86TI0 1168 aaPredicted RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 THEGQ9P2T0 379 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 ATF7P17544 494 aaPredicted RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 OR8K1Q8NGG5 319 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
SMAD3-201ENST00000327367 KIAA1468Q9P260 1216 aa18.1■□□□□ 0.49
SMAD3-201ENST00000327367 VAMP4O75379 141 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 KRT3P12035 628 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 ACTN3Q08043 901 aaPredicted RBP18.09■□□□□ 0.49
SMAD3-201ENST00000327367 EHHADHQ08426 723 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 CABP7Q86V35 215 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 FAM167BQ9BTA0 163 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 EPB41L5Q9HCM4 733 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 SEPT10Q9P0V9 454 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
SMAD3-201ENST00000327367 GNAT2P19087 354 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 PPP1R2P41236 205 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 MRPS25P82663 173 aaKnown RBP18.09■□□□□ 0.49
SMAD3-201ENST00000327367 NUB1Q9Y5A7 615 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 SOS1Q07889 1333 aaPredicted RBP18.09■□□□□ 0.49
SMAD3-201ENST00000327367 BRD1O95696 1058 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 RASSF7Q02833 373 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 BZW2Q9Y6E2 419 aaKnown RBP18.09■□□□□ 0.49
SMAD3-201ENST00000327367 MYO1CO00159 1063 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 EEF1B2P24534 225 aaKnown RBP18.09■□□□□ 0.49
SMAD3-201ENST00000327367 USP28Q96RU2 1077 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 PARD6BQ9BYG5 372 aa18.09■□□□□ 0.49
SMAD3-201ENST00000327367 SLC7A5Q01650 507 aa18.08■□□□□ 0.49
SMAD3-201ENST00000327367 SMYD2Q9NRG4 433 aa18.08■□□□□ 0.49
SMAD3-201ENST00000327367 PCDHB13Q9Y5F0 798 aa18.08■□□□□ 0.49
SMAD3-201ENST00000327367 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.49
SMAD3-201ENST00000327367 EXOC3O60645 756 aa18.08■□□□□ 0.49
SMAD3-201ENST00000327367 EEF1DP29692 281 aaKnown RBP18.08■□□□□ 0.49
SMAD3-201ENST00000327367 PHBP35232 272 aa18.08■□□□□ 0.49
SMAD3-201ENST00000327367 SLC52A1Q9NWF4 448 aa18.08■□□□□ 0.49
SMAD3-201ENST00000327367 TBK1Q9UHD2 729 aa18.08■□□□□ 0.49
SMAD3-201ENST00000327367 FOXO3O43524 673 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 TIMM10P62072 90 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 NNTQ13423 1086 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 ICE2Q659A1 982 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 SMARCA4P51532 1647 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 LLGL1Q15334 1064 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 THEMISQ8N1K5 641 aaPredicted RBP18.08■□□□□ 0.48
SMAD3-201ENST00000327367 RABGGTAQ92696 567 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 LLPHQ9BRT6 129 aaKnown RBP18.08■□□□□ 0.48
SMAD3-201ENST00000327367 WDR91A4D1P6 747 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 KRT19P08727 400 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 TMEM259Q4ZIN3 620 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 HP1BP3Q5SSJ5 553 aaPredicted RBP18.08■□□□□ 0.48
SMAD3-201ENST00000327367 NBPF5PQ86XG9 351 aaPredicted RBP18.08■□□□□ 0.48
SMAD3-201ENST00000327367 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
SMAD3-201ENST00000327367 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.48
SMAD3-201ENST00000327367 GSTA1P08263 222 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms