RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 COL24A1Q17RW2 1714 aa22.27■■□□□ 1.16
AP3S1-201ENST00000316788 TMEM232C9JQI7 657 aa22.27■■□□□ 1.16
AP3S1-201ENST00000316788 STX10O60499 249 aa22.27■■□□□ 1.16
AP3S1-201ENST00000316788 SPECC1LQ69YQ0 1117 aa22.27■■□□□ 1.16
AP3S1-201ENST00000316788 GSDMAQ96QA5 445 aa22.27■■□□□ 1.16
AP3S1-201ENST00000316788 ZMYND15Q9H091 742 aa22.27■■□□□ 1.16
AP3S1-201ENST00000316788 TAOK2Q9UL54 1235 aa22.27■■□□□ 1.16
AP3S1-201ENST00000316788 R3HDM1Q15032 1099 aaKnown RBP22.26■■□□□ 1.15
AP3S1-201ENST00000316788 NPY5RQ15761 445 aa22.26■■□□□ 1.15
AP3S1-201ENST00000316788 UTP14CQ5TAP6 766 aaKnown RBP22.26■■□□□ 1.15
AP3S1-201ENST00000316788 SYT10Q6XYQ8 523 aa22.26■■□□□ 1.15
AP3S1-201ENST00000316788 DDX41Q9UJV9 622 aaKnown RBP22.26■■□□□ 1.15
AP3S1-201ENST00000316788 V9GY48 417 aaPredicted RBP22.26■■□□□ 1.15
AP3S1-201ENST00000316788 LAMB1P07942 1786 aa22.26■■□□□ 1.15
AP3S1-201ENST00000316788 PLEKHA8P1O95397 391 aa22.26■■□□□ 1.15
AP3S1-201ENST00000316788 ATP2C1P98194 919 aaPredicted RBP22.26■■□□□ 1.15
AP3S1-201ENST00000316788 REXO1L1PQ8IX06 675 aa22.26■■□□□ 1.15
AP3S1-201ENST00000316788 CTCFLQ8NI51 663 aaPredicted RBP22.26■■□□□ 1.15
AP3S1-201ENST00000316788 A0A1B0GTH6 734 aa22.25■■□□□ 1.15
AP3S1-201ENST00000316788 USP17L12C9JPN9 530 aa22.25■■□□□ 1.15
AP3S1-201ENST00000316788 USP17L21D6R901 530 aa22.25■■□□□ 1.15
AP3S1-201ENST00000316788 RPS8P62241 208 aaKnown RBP22.25■■□□□ 1.15
AP3S1-201ENST00000316788 TTC38Q5R3I4 469 aa22.25■■□□□ 1.15
AP3S1-201ENST00000316788 SPATA1Q5VX52 437 aa22.25■■□□□ 1.15
AP3S1-201ENST00000316788 TRIM65Q6PJ69 517 aa22.25■■□□□ 1.15
AP3S1-201ENST00000316788 CELF1Q92879 486 aaKnown RBP22.25■■□□□ 1.15
AP3S1-201ENST00000316788 DCP1AQ9NPI6 582 aaPredicted RBP22.25■■□□□ 1.15
AP3S1-201ENST00000316788 CASZ1Q86V15 1759 aa22.25■■□□□ 1.15
AP3S1-201ENST00000316788 CDK11BP21127 795 aaKnown RBP22.24■■□□□ 1.15
AP3S1-201ENST00000316788 RFC4P35249 363 aa22.24■■□□□ 1.15
AP3S1-201ENST00000316788 MECOMQ03112 1051 aa22.24■■□□□ 1.15
AP3S1-201ENST00000316788 NR1I3Q14994 352 aa22.24■■□□□ 1.15
AP3S1-201ENST00000316788 PAGE5Q96GU1 130 aa22.24■■□□□ 1.15
AP3S1-201ENST00000316788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.24■■□□□ 1.15
AP3S1-201ENST00000316788 KIAA1551Q9HCM1 1747 aa22.24■■□□□ 1.15
AP3S1-201ENST00000316788 HIBADHP31937 336 aaKnown RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 DPYDQ12882 1025 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 CUL4BQ13620 913 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 NAA30Q147X3 362 aaPredicted RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 USP49Q70CQ1 688 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 HOMER1Q86YM7 354 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 MED15Q96RN5 788 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 ARID3AQ99856 593 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 BAG1Q99933 345 aaPredicted RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 NARFQ9UHQ1 456 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 MYH6P13533 1939 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 CYP2D7A0A087X1C5 515 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 ADRA2BP18089 450 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 CBX1P83916 185 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 EARS2Q5JPH6 523 aaKnown RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 SPTY2D1Q68D10 685 aaPredicted RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 FAM177A1Q8N128 213 aaPredicted RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 TC2NQ8N9U0 490 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 ANKS1AQ92625 1134 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 SYMPKQ92797 1274 aaKnown RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 DHX58Q96C10 678 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 NLRP3Q96P20 1036 aa22.23■■□□□ 1.15
AP3S1-201ENST00000316788 GTPBP4Q9BZE4 634 aaKnown RBP22.23■■□□□ 1.15
AP3S1-201ENST00000316788 A0A087X0B3 334 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 FAM205CA6NFA0 338 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 SMIM22K7EJ46 135 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 SCG2P13521 617 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 KIF5BP33176 963 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 PFKFB3Q16875 520 aaPredicted RBP22.22■■□□□ 1.15
AP3S1-201ENST00000316788 CCDC178Q5BJE1 867 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 PDILTQ8N807 584 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 CTAGE1Q96RT6 745 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 SH3GLB2Q9NR46 395 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 PPP2R2CQ9Y2T4 447 aa22.22■■□□□ 1.15
AP3S1-201ENST00000316788 ATP2B1P20020 1258 aa22.21■■□□□ 1.15
AP3S1-201ENST00000316788 HMGB2P26583 209 aaKnown RBP22.21■■□□□ 1.15
AP3S1-201ENST00000316788 CALML3P27482 149 aa22.21■■□□□ 1.15
AP3S1-201ENST00000316788 GTF2E1P29083 439 aaPredicted RBP22.21■■□□□ 1.15
AP3S1-201ENST00000316788 CDKAL1Q5VV42 579 aa22.21■■□□□ 1.15
AP3S1-201ENST00000316788 TBC1D9BQ66K14 1250 aa22.21■■□□□ 1.15
AP3S1-201ENST00000316788 GRAMD1CQ8IYS0 662 aa22.21■■□□□ 1.15
AP3S1-201ENST00000316788 SRBD1Q8N5C6 995 aaKnown RBP22.21■■□□□ 1.15
AP3S1-201ENST00000316788 PANX2Q96RD6 677 aa22.21■■□□□ 1.15
AP3S1-201ENST00000316788 IRS2Q9Y4H2 1338 aa22.2■■□□□ 1.15
AP3S1-201ENST00000316788 ZPR1O75312 459 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 PRDM1O75626 825 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 GYS1P13807 737 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 ZSCAN20P17040 1043 aaPredicted RBP22.2■■□□□ 1.14
AP3S1-201ENST00000316788 DMTNQ08495 405 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 ARL6IP4Q66PJ3 421 aaKnown RBP22.2■■□□□ 1.14
AP3S1-201ENST00000316788 APTXQ7Z2E3 356 aaKnown RBP22.2■■□□□ 1.14
AP3S1-201ENST00000316788 EPSTI1Q96J88 318 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 NAA15Q9BXJ9 866 aaKnown RBP22.2■■□□□ 1.14
AP3S1-201ENST00000316788 FAM53CQ9NYF3 392 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 DNAI1Q9UI46 699 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 ROBO3Q96MS0 1386 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 SYNRGQ9UMZ2 1314 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 ELF2Q15723 593 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 KMT5BQ4FZB7 885 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 MSL1Q68DK7 614 aa22.2■■□□□ 1.14
AP3S1-201ENST00000316788 VWA3AA6NCI4 1184 aa22.19■■□□□ 1.14
AP3S1-201ENST00000316788 WTIPA6NIX2 430 aaPredicted RBP22.19■■□□□ 1.14
AP3S1-201ENST00000316788 H2AFXP16104 143 aaPredicted RBP22.19■■□□□ 1.14
AP3S1-201ENST00000316788 PBX1P40424 430 aa22.19■■□□□ 1.14
AP3S1-201ENST00000316788 E2F4Q16254 413 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms