RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 DNM3Q9UQ16 869 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 EYA2O00167 538 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
SCN8A-208ENST00000599343 NONOQ15233 471 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCN8A-208ENST00000599343 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 TRIM68Q6AZZ1 485 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 GSDMBQ8TAX9 411 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 NOP56O00567 594 aaKnown RBP13.1□□□□□ -0.31
SCN8A-208ENST00000599343 STX2P32856 288 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 U2AF1L4Q8WU68 220 aaKnown RBP13.1□□□□□ -0.31
SCN8A-208ENST00000599343 A6NNZ2 444 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 PUM3Q15397 648 aaKnown RBP13.1□□□□□ -0.31
SCN8A-208ENST00000599343 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 XPO4Q9C0E2 1151 aaKnown RBP13.1□□□□□ -0.31
SCN8A-208ENST00000599343 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 TAF5LO75529 589 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 GNGT1P63211 74 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 CROCCP2Q86T23 111 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 CTAGE3PQ8IX95 158 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 EYA1Q99502 592 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 BIN2Q9UBW5 565 aaPredicted RBP13.1□□□□□ -0.31
SCN8A-208ENST00000599343 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 NOD1Q9Y239 953 aa13.1□□□□□ -0.31
SCN8A-208ENST00000599343 BCRP11274 1271 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 RABGAP1Q9Y3P9 1069 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 CAPN7Q9Y6W3 813 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 FLT4P35916 1363 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 RGS16O15492 202 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-208ENST00000599343 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
SCN8A-208ENST00000599343 MUM1Q2TAK8 710 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 GABPB2Q8TAK5 448 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-208ENST00000599343 APPBP2Q92624 585 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 ARHGAP42A6NI28 874 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 ABCB4P21439 1286 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 SRGAP1Q7Z6B7 1085 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 DESI2Q9BSY9 194 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 NACA2Q9H009 215 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 VPS54Q9P1Q0 977 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-208ENST00000599343 GNPATO15228 680 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 ATP1A2P50993 1020 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 CCDC125Q86Z20 511 aa13.09□□□□□ -0.31
SCN8A-208ENST00000599343 ZNF445P59923 1031 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 KRT25Q7Z3Z0 450 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 BUB1O43683 1085 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 CCDC13Q8IYE1 715 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 CPXCR1Q8N123 301 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 GBP5Q96PP8 586 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 RNF40O75150 1001 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 SLC12A2P55011 1212 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 PALM2Q8IXS6 379 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 SAR1BQ9Y6B6 198 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 PARD3Q8TEW0 1356 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
SCN8A-208ENST00000599343 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
SCN8A-208ENST00000599343 BAG2O95816 211 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 KRT12Q99456 494 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 NSMCE1Q8WV22 266 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 RAB17Q9H0T7 212 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 KCNK3O14649 394 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 TROVE2P10155 538 aaKnown RBP eCLIP13.07□□□□□ -0.32
SCN8A-208ENST00000599343 ZSCAN26Q16670 478 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 UHMK1Q8TAS1 419 aaKnown RBP13.07□□□□□ -0.32
SCN8A-208ENST00000599343 RSAD2Q8WXG1 361 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 RIPOR2Q9Y4F9 1068 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 SGSM2O43147 1006 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 VPS41P49754 854 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 SESN3P58005 492 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 HINFPQ9BQA5 517 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 CFBP00751 764 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 TNNI1P19237 187 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 FAM47AQ5JRC9 791 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 ADAT2Q7Z6V5 191 aaKnown RBP13.07□□□□□ -0.32
SCN8A-208ENST00000599343 DPH5Q9H2P9 285 aa13.07□□□□□ -0.32
SCN8A-208ENST00000599343 IFNB1P01574 187 aa13.06□□□□□ -0.32
SCN8A-208ENST00000599343 CYP2J2P51589 502 aa13.06□□□□□ -0.32
SCN8A-208ENST00000599343 TAB3Q8N5C8 712 aaPredicted RBP13.06□□□□□ -0.32
SCN8A-208ENST00000599343 MICAL1Q8TDZ2 1067 aa13.06□□□□□ -0.32
SCN8A-208ENST00000599343 TNRQ92752 1358 aa13.06□□□□□ -0.32
SCN8A-208ENST00000599343 SLC1A4P43007 532 aa13.06□□□□□ -0.32
SCN8A-208ENST00000599343 TCP10Q12799 353 aa13.06□□□□□ -0.32
SCN8A-208ENST00000599343 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
SCN8A-208ENST00000599343 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms