RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 EAPPQ56P03 285 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-207ENST00000566095 FAM47AQ5JRC9 791 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-207ENST00000566095 WASF1Q92558 559 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 TCEANC2Q96MN5 208 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 LZTS2Q9BRK4 669 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 AS3MTQ9HBK9 375 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 PGAP2Q9UHJ9 254 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 TPCN1Q9ULQ1 816 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 SMC3Q9UQE7 1217 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 GOLGB1Q14789 3259 aaKnown RBP11.46□□□□□ -0.58
SF3B3-207ENST00000566095 GOLGA8AA7E2F4 631 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 GOLGA6L22H0YM25 854 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 CTNND1O60716 968 aaKnown RBP11.45□□□□□ -0.58
SF3B3-207ENST00000566095 IREB2P48200 963 aaKnown RBP11.45□□□□□ -0.58
SF3B3-207ENST00000566095 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
SF3B3-207ENST00000566095 ICA1Q05084 483 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 SEC23AQ15436 765 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 APOA5Q6Q788 366 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 SH3BP5LQ7L8J4 393 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 CHST3Q7LGC8 479 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 LDHDQ86WU2 507 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 ZFPM1Q8IX07 1006 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 ZNF654Q8IZM8 581 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 FAM184AQ8NB25 1140 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 GTF3C6Q969F1 213 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 LRRC2Q9BYS8 371 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 PICK1Q9NRD5 415 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 MTMR4Q9NYA4 1195 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 NYAP2Q9P242 653 aa11.45□□□□□ -0.58
SF3B3-207ENST00000566095 UNCXA6NJT0 531 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 BRD1O95696 1058 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 EGFRP00533 1210 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 PDIA3P30101 505 aaKnown RBP11.44□□□□□ -0.58
SF3B3-207ENST00000566095 CAP2P40123 477 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 RTN1Q16799 776 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 SKOR2Q2VWA4 1001 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-207ENST00000566095 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 ARMC9Q7Z3E5 817 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 MICU3Q86XE3 530 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 SLC44A5Q8NCS7 719 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 ZKSCAN3Q9BRR0 538 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 GOPCQ9HD26 462 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 INCENPQ9NQS7 918 aa11.44□□□□□ -0.58
SF3B3-207ENST00000566095 AKR1B1P15121 316 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 XBP1P17861 261 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 HIRAP54198 1017 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-207ENST00000566095 STK3Q13188 491 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 NFKBIBQ15653 356 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 ME3Q16798 604 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 GPATCH4Q5T3I0 446 aaKnown RBP11.43□□□□□ -0.58
SF3B3-207ENST00000566095 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 FANCBQ8NB91 859 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 SMARCC2Q8TAQ2 1214 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 NUP133Q8WUM0 1156 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 TEPSINQ96N21 525 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 CSADQ9Y600 493 aa11.43□□□□□ -0.58
SF3B3-207ENST00000566095 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 GH2P01242 217 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 PARP1P09874 1014 aaKnown RBP11.42□□□□□ -0.58
SF3B3-207ENST00000566095 NOVP48745 357 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 USP14P54578 494 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 FKBP1BP68106 108 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 ATP2B2Q01814 1243 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 TRAF1Q13077 416 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 ATL3Q6DD88 541 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 SCYL3Q8IZE3 742 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-207ENST00000566095 DCAF4Q8WV16 495 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 MKL1Q969V6 931 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 DNAJC18Q9H819 358 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 CLIP2Q9UDT6 1046 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 ZBTB21Q9ULJ3 1066 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
SF3B3-207ENST00000566095 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 SMARCA1P28370 1054 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 MCM4P33991 863 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 SSRP1Q08945 709 aaKnown RBP11.41□□□□□ -0.58
SF3B3-207ENST00000566095 TRIM29Q14134 588 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 TTLL12Q14166 644 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-207ENST00000566095 NOL9Q5SY16 702 aaKnown RBP11.41□□□□□ -0.58
SF3B3-207ENST00000566095 NBPF12Q5TAG4 269 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-207ENST00000566095 GMCL1P1Q8NEA9 526 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 WRNIP1Q96S55 665 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 FEZ1Q99689 392 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 TMEM47Q9BQJ4 181 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 RRAGCQ9HB90 399 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 IL17RBQ9NRM6 502 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 ZNF112Q9UJU3 913 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
SF3B3-207ENST00000566095 ASTN2O75129 1339 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-207ENST00000566095 STK36Q9NRP7 1315 aa11.4□□□□□ -0.58
SF3B3-207ENST00000566095 GDF11O95390 407 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms