RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 B4GALNT3Q6L9W6 998 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 CLEC10AQ8IUN9 316 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 PI4K2BQ8TCG2 481 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 APPBP2Q92624 585 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 GCC1Q96CN9 775 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 PAGR1Q9BTK6 254 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 TMEM106CQ9BVX2 250 aa16.37■□□□□ 0.21
VPS9D1-204ENST00000565023 M0R2C6 588 aa16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 AKR1B1P15121 316 aa16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 GCLCP48506 637 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 FAM110CQ1W6H9 321 aa16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 STRBPQ96SI9 672 aaKnown RBP16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 RWDD1Q9H446 243 aaPredicted RBP16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 SWAP70Q9UH65 585 aa16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
VPS9D1-204ENST00000565023 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 GPAA1O43292 621 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 APPP05067 770 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 EN2P19622 333 aaPredicted RBP16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 GRK4P32298 578 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 CDK8P49336 464 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 FLT3LGP49771 235 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 HERVK_113P62684 666 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 ATP2B2Q01814 1243 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 MTFR1Q15390 333 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 C12orf60Q5U649 245 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 COA7Q96BR5 231 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 LNPKQ9C0E8 428 aa16.35■□□□□ 0.21
VPS9D1-204ENST00000565023 HTTP42858 3142 aa16.34■□□□□ 0.21
VPS9D1-204ENST00000565023 IGHDP01880 384 aa16.34■□□□□ 0.21
VPS9D1-204ENST00000565023 ZFYP08048 801 aaPredicted RBP16.34■□□□□ 0.21
VPS9D1-204ENST00000565023 HOXA7P31268 230 aaPredicted RBP16.34■□□□□ 0.21
VPS9D1-204ENST00000565023 USP14P54578 494 aa16.34■□□□□ 0.21
VPS9D1-204ENST00000565023 SMC5Q8IY18 1101 aa16.34■□□□□ 0.21
VPS9D1-204ENST00000565023 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 ADCY3O60266 1144 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 ELNP15502 786 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 VCAM1P19320 739 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 TDO2P48775 406 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 TXNRD2Q9NNW7 524 aa16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
VPS9D1-204ENST00000565023 A0A1W2PRG0 241 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L15C9J2P7 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L13C9JLJ4 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L11C9JVI0 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L18D6R9N7 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L22D6RA61 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L17D6RBQ6 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L19D6RCP7 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L20D6RJB6 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 ICA1Q05084 483 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 USP17L24Q0WX57 530 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 SZT2Q5T011 3432 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 CCAR1Q8IX12 1150 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 SALL3Q9BXA9 1300 aa16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 EPB41L4AQ9HCS5 686 aaPredicted RBP16.32■□□□□ 0.2
VPS9D1-204ENST00000565023 RAD21O60216 631 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 PDE1AP54750 535 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 UBXN2AP68543 259 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 Q3C1V9 767 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 WDR78Q5VTH9 848 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 SLAIN1Q8ND83 568 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 RBPJLQ9UBG7 517 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 CENPFP49454 3210 aa16.31■□□□□ 0.2
VPS9D1-204ENST00000565023 BRCA2P51587 3418 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 CCL5P13501 91 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 ERVK-9P63128 1117 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 ERVK-24P63145 666 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 CATSPERGQ6ZRH7 1159 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 SPICE1Q8N0Z3 855 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 CCDC17Q96LX7 622 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 PLXNB2O15031 1838 aa16.3■□□□□ 0.2
VPS9D1-204ENST00000565023 TRIM6-TRIM34B2RNG4 842 aa16.29■□□□□ 0.2
VPS9D1-204ENST00000565023 INHAP05111 366 aa16.29■□□□□ 0.2
VPS9D1-204ENST00000565023 GNAT2P19087 354 aa16.29■□□□□ 0.2
VPS9D1-204ENST00000565023 CYP2B6P20813 491 aa16.29■□□□□ 0.2
VPS9D1-204ENST00000565023 KIAA1755Q5JYT7 1200 aa16.29■□□□□ 0.2
VPS9D1-204ENST00000565023 ZMYM1Q5SVZ6 1142 aa16.29■□□□□ 0.2
VPS9D1-204ENST00000565023 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms