RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
SEC11A-206ENST00000558924 PPP2R2CQ9Y2T4 447 aa13.78□□□□□ -0.2
SEC11A-206ENST00000558924 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
SEC11A-206ENST00000558924 LMTK3Q96Q04 1460 aa13.78□□□□□ -0.2
SEC11A-206ENST00000558924 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.2
SEC11A-206ENST00000558924 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.2
SEC11A-206ENST00000558924 CAGE1Q8TC20 777 aa13.77□□□□□ -0.2
SEC11A-206ENST00000558924 TMEM87BQ96K49 555 aa13.77□□□□□ -0.2
SEC11A-206ENST00000558924 NLRP3Q96P20 1036 aa13.77□□□□□ -0.2
SEC11A-206ENST00000558924 VPS16Q9H269 839 aa13.77□□□□□ -0.2
SEC11A-206ENST00000558924 SOWAHDA6NJG2 315 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 PSEN1P49768 467 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 LEKR1Q6ZMV7 388 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 KRI1Q8N9T8 703 aaKnown RBP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 FANCBQ8NB91 859 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 NUP88Q99567 741 aaPredicted RBP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 HOOK1Q9UJC3 728 aaKnown RBP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 SLIT3O75094 1523 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 N4BP1O75113 896 aaKnown RBP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 EIF6P56537 245 aaKnown RBP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 TRIM28Q13263 835 aaKnown RBP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 SHC4Q6S5L8 630 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 PSMB7Q99436 277 aa13.77□□□□□ -0.21
SEC11A-206ENST00000558924 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
SEC11A-206ENST00000558924 A0A0U1RQJ8 604 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 YEATS4O95619 227 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 GOLGA8HP0CJ92 632 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 PIK3AP1Q6ZUJ8 805 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 GPKOWQ92917 476 aaPredicted RBP eCLIP13.76□□□□□ -0.21
SEC11A-206ENST00000558924 EPSTI1Q96J88 318 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 RNF41Q9H4P4 317 aaPredicted RBP13.76□□□□□ -0.21
SEC11A-206ENST00000558924 GUCA1BQ9UMX6 200 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
SEC11A-206ENST00000558924 AFDNP55196 1824 aaKnown RBP13.76□□□□□ -0.21
SEC11A-206ENST00000558924 DIXDC1Q155Q3 683 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
SEC11A-206ENST00000558924 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
SEC11A-206ENST00000558924 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
SEC11A-206ENST00000558924 CNNM2Q9H8M5 875 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 TPM1P09493 284 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 ENGASEQ8NFI3 743 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 IGDCC4Q8TDY8 1250 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
SEC11A-206ENST00000558924 CCDC196A0A1B0GTZ2 297 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 G3V3G9 751 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 DYNLL2Q96FJ2 89 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 PDE11AQ9HCR9 933 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 C5P01031 1676 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 ENC1O14682 589 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 KIF5CO60282 957 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
SEC11A-206ENST00000558924 WASF1Q92558 559 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 AK7Q96M32 723 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 PARD6BQ9BYG5 372 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 GEMIN8Q9NWZ8 242 aaKnown RBP13.75□□□□□ -0.21
SEC11A-206ENST00000558924 CPDO75976 1380 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 CMA1P23946 247 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 PDE4BQ07343 736 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
SEC11A-206ENST00000558924 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
SEC11A-206ENST00000558924 POLD4Q9HCU8 107 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 N4BP3O15049 544 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 USP17L8P0C7I0 530 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 PICALMQ13492 652 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 CCDC93Q567U6 631 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 MUM1L1Q5H9M0 696 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 TBC1D9BQ66K14 1250 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 CSRNP2Q9H175 543 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 L2HGDHQ9H9P8 463 aa13.74□□□□□ -0.21
SEC11A-206ENST00000558924 C6orf229H3BNL8 230 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 RFC4P35249 363 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 RPS8P62241 208 aaKnown RBP13.73□□□□□ -0.21
SEC11A-206ENST00000558924 INTS5Q6P9B9 1019 aaKnown RBP13.73□□□□□ -0.21
SEC11A-206ENST00000558924 SARM1Q6SZW1 724 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 MAPKAPK5Q8IW41 473 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 SLC44A5Q8NCS7 719 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 TFR2Q9UP52 801 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 CCP110O43303 1012 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 MARCH6O60337 910 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
SEC11A-206ENST00000558924 HEATR3Q7Z4Q2 680 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 ZNF34Q8IZ26 560 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 IGSF22Q8N9C0 903 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 TACC3Q9Y6A5 838 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 TEX33O43247 280 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 HIBADHP31937 336 aaKnown RBP13.73□□□□□ -0.21
SEC11A-206ENST00000558924 TSR1Q2NL82 804 aaKnown RBP13.73□□□□□ -0.21
SEC11A-206ENST00000558924 TTC31Q49AM3 519 aaPredicted RBP13.73□□□□□ -0.21
SEC11A-206ENST00000558924 SLF1Q9BQI6 1058 aa13.73□□□□□ -0.21
SEC11A-206ENST00000558924 CC2D1AQ6P1N0 951 aaPredicted RBP13.72□□□□□ -0.21
SEC11A-206ENST00000558924 ACRBPQ8NEB7 543 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms