RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 UPK3BL2E5RIL1 263 aa7.67□□□□□ -1.18
VRK1-207ENST00000557352 GBP2P32456 591 aaPredicted RBP7.67□□□□□ -1.18
VRK1-207ENST00000557352 TMEM201Q5SNT2 666 aa7.67□□□□□ -1.18
VRK1-207ENST00000557352 ZSWIM9Q86XI8 627 aa7.67□□□□□ -1.18
VRK1-207ENST00000557352 PIWIL2Q8TC59 973 aaKnown RBP7.67□□□□□ -1.18
VRK1-207ENST00000557352 PPP1R13LQ8WUF5 828 aa7.67□□□□□ -1.18
VRK1-207ENST00000557352 Q96M66 194 aa7.67□□□□□ -1.18
VRK1-207ENST00000557352 C19orf73Q9NVV2 129 aa7.67□□□□□ -1.18
VRK1-207ENST00000557352 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.67□□□□□ -1.18
VRK1-207ENST00000557352 PWP1Q13610 501 aa7.66□□□□□ -1.18
VRK1-207ENST00000557352 KCNMB1Q16558 191 aa7.66□□□□□ -1.18
VRK1-207ENST00000557352 FYB2Q5VWT5 728 aa7.66□□□□□ -1.18
VRK1-207ENST00000557352 FAM13CQ8NE31 585 aa7.66□□□□□ -1.18
VRK1-207ENST00000557352 CYB5D2Q8WUJ1 264 aa7.66□□□□□ -1.18
VRK1-207ENST00000557352 ZNF503-AS2A6NEH8 195 aa7.65□□□□□ -1.18
VRK1-207ENST00000557352 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
VRK1-207ENST00000557352 ITGAEP38570 1179 aa7.65□□□□□ -1.18
VRK1-207ENST00000557352 AFMP43652 599 aa7.65□□□□□ -1.18
VRK1-207ENST00000557352 FAM160A1Q05DH4 1040 aa7.65□□□□□ -1.18
VRK1-207ENST00000557352 MESP2Q0VG99 397 aa7.65□□□□□ -1.18
VRK1-207ENST00000557352 PRR36Q9H6K5 1346 aa7.65□□□□□ -1.18
VRK1-207ENST00000557352 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
VRK1-207ENST00000557352 WASH4PA8MWX3 477 aa7.64□□□□□ -1.19
VRK1-207ENST00000557352 GDNFP39905 211 aa7.64□□□□□ -1.19
VRK1-207ENST00000557352 YARSP54577 528 aaKnown RBP7.64□□□□□ -1.19
VRK1-207ENST00000557352 GOLM1Q8NBJ4 401 aa7.64□□□□□ -1.19
VRK1-207ENST00000557352 ALPK1Q96QP1 1244 aa7.64□□□□□ -1.19
VRK1-207ENST00000557352 DUSP15Q9H1R2 295 aaPredicted RBP7.64□□□□□ -1.19
VRK1-207ENST00000557352 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.63□□□□□ -1.19
VRK1-207ENST00000557352 ESR1P03372 595 aa7.63□□□□□ -1.19
VRK1-207ENST00000557352 GARTP22102 1010 aa7.63□□□□□ -1.19
VRK1-207ENST00000557352 SNAP47Q5SQN1 464 aa7.63□□□□□ -1.19
VRK1-207ENST00000557352 TMPRSS7Q7RTY8 843 aa7.63□□□□□ -1.19
VRK1-207ENST00000557352 SLFN12Q8IYM2 578 aa7.63□□□□□ -1.19
VRK1-207ENST00000557352 REV1Q9UBZ9 1251 aa7.63□□□□□ -1.19
VRK1-207ENST00000557352 LRRC10BA6NIK2 292 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 DBX1A6NMT0 343 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 CHURC1-FNTBB4DL54 471 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 HTR3BO95264 441 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 MPP2Q14168 576 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 ERMP1Q7Z2K6 904 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 KIRREL1Q96J84 757 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 COPRSQ9NQ92 184 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 KBTBD4Q9NVX7 518 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 FAM53CQ9NYF3 392 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 SLAMF8Q9P0V8 285 aa7.62□□□□□ -1.19
VRK1-207ENST00000557352 GLI1P08151 1106 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 REC114Q7Z4M0 266 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 KSR1Q8IVT5 923 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 DTWD2Q8NBA8 298 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 LIN37Q96GY3 246 aaPredicted RBP7.61□□□□□ -1.19
VRK1-207ENST00000557352 CCDC120Q96HB5 630 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 BCL2L13Q9BXK5 485 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 GPR62Q9BZJ7 368 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 KLHL3Q9UH77 587 aa7.61□□□□□ -1.19
VRK1-207ENST00000557352 DNAJC25-GNG10A0A024R161 153 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 DNAJA2O60884 412 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 LRRN2O75325 713 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 SRFP11831 508 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 TPP2P29144 1249 aaPredicted RBP7.6□□□□□ -1.19
VRK1-207ENST00000557352 MLANAQ16655 118 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 GAB4Q2WGN9 574 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 RALGPS1Q5JS13 557 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 FBXL19Q6PCT2 694 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 FAM196AQ6ZSG2 479 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 CREG2Q8IUH2 290 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 BAHD1Q8TBE0 780 aaPredicted RBP7.6□□□□□ -1.19
VRK1-207ENST00000557352 RNF141Q8WVD5 230 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 FAM84AQ96KN4 292 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 KRTAP4-7Q9BYR0 210 aa7.6□□□□□ -1.19
VRK1-207ENST00000557352 TRIT1Q9H3H1 467 aaKnown RBP7.6□□□□□ -1.19
VRK1-207ENST00000557352 TLR3O15455 904 aaKnown RBP7.59□□□□□ -1.19
VRK1-207ENST00000557352 TNNI2P48788 182 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 TMEM67Q5HYA8 995 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 TTC6Q86TZ1 520 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 GIPC2Q8TF65 315 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 CCDC74BQ96LY2 380 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 GPATCH2Q9NW75 528 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 KCNH3Q9ULD8 1083 aa7.59□□□□□ -1.19
VRK1-207ENST00000557352 MRPL58Q14197 206 aaKnown RBP7.58□□□□□ -1.2
VRK1-207ENST00000557352 PKN1Q16512 942 aa7.58□□□□□ -1.2
VRK1-207ENST00000557352 ZNF326Q5BKZ1 582 aaKnown RBP7.58□□□□□ -1.2
VRK1-207ENST00000557352 TSPYL5Q86VY4 417 aaPredicted RBP7.58□□□□□ -1.2
VRK1-207ENST00000557352 KREMEN1Q96MU8 473 aa7.58□□□□□ -1.2
VRK1-207ENST00000557352 SLC38A3Q99624 504 aa7.58□□□□□ -1.2
VRK1-207ENST00000557352 TMEM59LQ9UK28 342 aa7.58□□□□□ -1.2
VRK1-207ENST00000557352 GREM1O60565 184 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 EIF4A3P38919 411 aaKnown RBP7.57□□□□□ -1.2
VRK1-207ENST00000557352 CILP2Q8IUL8 1156 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 PHACTR4Q8IZ21 702 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 BHLHE22Q8NFJ8 381 aaPredicted RBP7.57□□□□□ -1.2
VRK1-207ENST00000557352 KIF2CQ99661 725 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 LRRC3Q9BY71 257 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 ADAMTS10Q9H324 1103 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 DUSP13Q9UII6 198 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 ROBO2Q9HCK4 1378 aa7.57□□□□□ -1.2
VRK1-207ENST00000557352 HK2P52789 917 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms