RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TNPO2O14787 897 aaKnown RBP14.86□□□□□ -0.03
SHMT2-214ENST00000554604 MYCP01106 439 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-214ENST00000554604 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-214ENST00000554604 CYP2D6P10635 497 aa14.86□□□□□ -0.03
SHMT2-214ENST00000554604 GABPAQ06546 454 aa14.86□□□□□ -0.03
SHMT2-214ENST00000554604 ZYXQ15942 572 aaKnown RBP14.86□□□□□ -0.03
SHMT2-214ENST00000554604 FAM110CQ1W6H9 321 aa14.86□□□□□ -0.03
SHMT2-214ENST00000554604 USP17L2Q6R6M4 530 aa14.86□□□□□ -0.03
SHMT2-214ENST00000554604 SH3TC2Q8TF17 1288 aa14.86□□□□□ -0.03
SHMT2-214ENST00000554604 TBC1D32Q96NH3 1257 aa14.86□□□□□ -0.03
SHMT2-214ENST00000554604 PUS7LQ9H0K6 701 aaKnown RBP14.86□□□□□ -0.03
SHMT2-214ENST00000554604 SWAP70Q9UH65 585 aa14.86□□□□□ -0.03
SHMT2-214ENST00000554604 POTEFA5A3E0 1075 aa14.85□□□□□ -0.03
SHMT2-214ENST00000554604 RNF113AO15541 343 aaKnown RBP14.85□□□□□ -0.03
SHMT2-214ENST00000554604 GLRX3O76003 335 aaKnown RBP14.85□□□□□ -0.03
SHMT2-214ENST00000554604 MX1P20591 662 aa14.85□□□□□ -0.03
SHMT2-214ENST00000554604 HOXA7P31268 230 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-214ENST00000554604 USP14P54578 494 aa14.85□□□□□ -0.03
SHMT2-214ENST00000554604 EVX2Q03828 476 aa14.85□□□□□ -0.03
SHMT2-214ENST00000554604 PLEKHM2Q8IWE5 1019 aa14.85□□□□□ -0.03
SHMT2-214ENST00000554604 OTUD7AQ8TE49 926 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-214ENST00000554604 COA7Q96BR5 231 aa14.85□□□□□ -0.03
SHMT2-214ENST00000554604 BIN2Q9UBW5 565 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-214ENST00000554604 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
SHMT2-214ENST00000554604 USP17L12C9JPN9 530 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 USP17L21D6R901 530 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
SHMT2-214ENST00000554604 GRK4P32298 578 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 PRKCZQ05513 592 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 SEPT2Q15019 361 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 SLC44A5Q8NCS7 719 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 APPBP2Q92624 585 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 DYNLL2Q96FJ2 89 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 P2RX7Q99572 595 aaKnown RBP14.84□□□□□ -0.03
SHMT2-214ENST00000554604 EMILIN3Q9NT22 766 aa14.84□□□□□ -0.03
SHMT2-214ENST00000554604 BRCA2P51587 3418 aa14.83□□□□□ -0.03
SHMT2-214ENST00000554604 CYP2D7A0A087X1C5 515 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 FLT3LGP49771 235 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 HERVK_113P62684 666 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 C12orf60Q5U649 245 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 PI4K2BQ8TCG2 481 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 ACER1Q8TDN7 264 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 STRBPQ96SI9 672 aaKnown RBP14.83□□□□□ -0.04
SHMT2-214ENST00000554604 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 KIAA1683Q9H0B3 1180 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 GABRQQ9UN88 632 aa14.83□□□□□ -0.04
SHMT2-214ENST00000554604 ADCY3O60266 1144 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 CDK8P49336 464 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 TTC22Q5TAA0 569 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 TMEM179Q6ZVK1 233 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 CCAR1Q8IX12 1150 aaKnown RBP14.82□□□□□ -0.04
SHMT2-214ENST00000554604 SLAIN1Q8ND83 568 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 OSBP2Q969R2 916 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 C12orf42Q96LP6 360 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 CCDC17Q96LX7 622 aa14.82□□□□□ -0.04
SHMT2-214ENST00000554604 ARPP21Q9UBL0 812 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 GPAA1O43292 621 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 APPP05067 770 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 GNAT2P19087 354 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 EN2P19622 333 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-214ENST00000554604 GUCY1A2P33402 732 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 UBXN2AP68543 259 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 GIMAP6Q6P9H5 292 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 CTR9Q6PD62 1173 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 GTF3C2Q8WUA4 911 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-214ENST00000554604 PAGR1Q9BTK6 254 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 OSBPL3Q9H4L5 887 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 MORF4L1Q9UBU8 362 aa14.81□□□□□ -0.04
SHMT2-214ENST00000554604 MKI67P46013 3256 aaKnown RBP14.81□□□□□ -0.04
SHMT2-214ENST00000554604 GSG1L2A8MUP6 293 aa14.8□□□□□ -0.04
SHMT2-214ENST00000554604 VCAM1P19320 739 aa14.8□□□□□ -0.04
SHMT2-214ENST00000554604 TDO2P48775 406 aa14.8□□□□□ -0.04
SHMT2-214ENST00000554604 C16orf86Q6ZW13 317 aa14.8□□□□□ -0.04
SHMT2-214ENST00000554604 ARHGEF10LQ9HCE6 1279 aa14.8□□□□□ -0.04
SHMT2-214ENST00000554604 DAXXQ9UER7 740 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-214ENST00000554604 CEP290O15078 2479 aa14.8□□□□□ -0.04
SHMT2-214ENST00000554604 MINDY4BA8MYZ0 360 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 M0R2C6 588 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 CDC45O75419 566 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 AKR1B1P15121 316 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 GSPT1P15170 499 aaKnown RBP14.79□□□□□ -0.04
SHMT2-214ENST00000554604 ELNP15502 786 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 ERVK-9P63128 1117 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 ERVK-24P63145 666 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 ICA1Q05084 483 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 IRF5Q13568 498 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 MTFR1Q15390 333 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 C22orf23Q9BZE7 217 aa14.79□□□□□ -0.04
SHMT2-214ENST00000554604 NACAP1Q9BZK3 213 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms