RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 GINM1Q9NU53 330 aa16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 RBPJLQ9UBG7 517 aa16.96■□□□□ 0.31
SPTLC2-202ENST00000554365 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 MAPK4P31152 587 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 MNX1P50219 401 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 ERVK-9P63128 1117 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 ERVK-24P63145 666 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 ZYXQ15942 572 aaKnown RBP16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 Q3C1V9 767 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 SLC17A8Q8NDX2 589 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 EAF2Q96CJ1 260 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 PORCNQ9H237 461 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 CWC22Q9HCG8 908 aaKnown RBP16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 EMILIN3Q9NT22 766 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 OGDHLQ9ULD0 1010 aa16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 DDX60LQ5H9U9 1706 aaKnown RBP16.95■□□□□ 0.3
SPTLC2-202ENST00000554365 IDH1O75874 414 aaKnown RBP16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 GH2P01242 217 aa16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 XRCC5P13010 732 aaKnown RBP16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 MAP3K21Q5TCX8 1036 aa16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 GPR142Q7Z601 462 aa16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 TRMT44Q8IYL2 757 aaKnown RBP16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 MIGA1Q8NAN2 632 aa16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 FEZ1Q99689 392 aa16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 CCDC8Q9H0W5 538 aaPredicted RBP16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 TLR7Q9NYK1 1049 aaKnown RBP16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 CDK5RAP2Q96SN8 1893 aa16.94■□□□□ 0.3
SPTLC2-202ENST00000554365 BMP8BP34820 402 aa16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 RGS2P41220 211 aa16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 USP5P45974 858 aa16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 CACNB2Q08289 660 aaPredicted RBP16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 CCL14Q16627 93 aa16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 PLEKHH3Q7Z736 793 aa16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 GTF3C2Q8WUA4 911 aaPredicted RBP16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 DBNLQ9UJU6 430 aaKnown RBP16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
SPTLC2-202ENST00000554365 CCND3P30281 292 aaPredicted RBP16.92■□□□□ 0.3
SPTLC2-202ENST00000554365 MAGEA10P43363 369 aaPredicted RBP16.92■□□□□ 0.3
SPTLC2-202ENST00000554365 CLASRPQ8N2M8 674 aaKnown RBP16.92■□□□□ 0.3
SPTLC2-202ENST00000554365 USP6NLQ92738 828 aa16.92■□□□□ 0.3
SPTLC2-202ENST00000554365 MYO5AQ9Y4I1 1855 aaKnown RBP16.92■□□□□ 0.3
SPTLC2-202ENST00000554365 PFASO15067 1338 aa16.92■□□□□ 0.3
SPTLC2-202ENST00000554365 IGSF3O75054 1194 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 MORN1Q5T089 497 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 WDR78Q5VTH9 848 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 POTEEQ6S8J3 1075 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 AACSQ86V21 672 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 PLEKHM2Q8IWE5 1019 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 MAGEB6Q8N7X4 407 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 APBA2Q99767 749 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 NDUFB9Q9Y6M9 179 aa16.91■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 MAP2K5Q13163 448 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 UBE2OQ9C0C9 1292 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 LAMA3Q16787 3333 aa16.9■□□□□ 0.3
SPTLC2-202ENST00000554365 GLRX3O76003 335 aaKnown RBP16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 CCNA1P78396 465 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 LHX8Q68G74 356 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 TATDN1Q6P1N9 297 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 TTC6Q86TZ1 520 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 CERS3Q8IU89 383 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 TDHQ8IZJ6 230 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 DEFB123Q8N688 67 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 EDC3Q96F86 508 aaKnown RBP16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 C12orf42Q96LP6 360 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 SERPINB13Q9UIV8 391 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
SPTLC2-202ENST00000554365 DLL1O00548 723 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 CNMDO75829 334 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 COL6A1P12109 1028 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 USP14P54578 494 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 MAP3K12Q12852 859 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 ABCB5Q2M3G0 1257 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 EHD4Q9H223 541 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 OSBPL3Q9H4L5 887 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 CABP5Q9NP86 173 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 MYH1P12882 1939 aa16.88■□□□□ 0.29
SPTLC2-202ENST00000554365 IFIT2P09913 472 aaKnown RBP16.87■□□□□ 0.29
SPTLC2-202ENST00000554365 VCAM1P19320 739 aa16.87■□□□□ 0.29
SPTLC2-202ENST00000554365 MX1P20591 662 aa16.87■□□□□ 0.29
SPTLC2-202ENST00000554365 PDE1AP54750 535 aa16.87■□□□□ 0.29
SPTLC2-202ENST00000554365 LRRC26Q2I0M4 334 aa16.87■□□□□ 0.29
SPTLC2-202ENST00000554365 LRIT3Q3SXY7 679 aa16.87■□□□□ 0.29
SPTLC2-202ENST00000554365 MFSD14CQ5VZR4 134 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms