RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 OSBP2Q969R2 916 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 ZC3H12CQ9C0D7 883 aaKnown RBP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 N4BP3O15049 544 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 CIB2O75838 187 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 SLU7O95391 586 aaKnown RBP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 PDIA3P30101 505 aaKnown RBP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 STAT6P42226 847 aa12.14□□□□□ -0.47
CPNE4-209ENST00000512055 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 ZNF274Q96GC6 653 aaPredicted RBP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 ARHGEF28Q8N1W1 1705 aaKnown RBP12.14□□□□□ -0.47
CPNE4-209ENST00000512055 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 PPM1FP49593 454 aaPredicted RBP12.13□□□□□ -0.47
CPNE4-209ENST00000512055 HLFQ16534 295 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 AKNAD1Q5T1N1 836 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 PLIN2Q99541 437 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 TACO1Q9BSH4 297 aaKnown RBP12.13□□□□□ -0.47
CPNE4-209ENST00000512055 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 UFL1O94874 794 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 IFNL3Q8IZI9 196 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 ABTB1Q969K4 478 aaPredicted RBP12.13□□□□□ -0.47
CPNE4-209ENST00000512055 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 MKL2Q9ULH7 1088 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 DIP2BQ9P265 1576 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 CCDC150Q8NCX0 1101 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 FAM76AQ8TAV0 307 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 CALML4Q96GE6 196 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 IFT74Q96LB3 600 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 COL3A1P02461 1466 aaPredicted RBP12.13□□□□□ -0.47
CPNE4-209ENST00000512055 VWA3AA6NCI4 1184 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 BMP15O95972 392 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 GBP1P32455 592 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 GNAQP50148 359 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 RPS8P62241 208 aaKnown RBP12.13□□□□□ -0.47
CPNE4-209ENST00000512055 ATP10DQ9P241 1426 aa12.13□□□□□ -0.47
CPNE4-209ENST00000512055 DEXIO95424 95 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 VIMP08670 466 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 MTIF2P46199 727 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 CHRNDQ07001 517 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 TRMT1LQ7Z2T5 733 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 TECPR2O15040 1411 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 NDUFAB1O14561 156 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 MYO1BO43795 1136 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 RNF8O76064 485 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 ZNF202O95125 648 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 CNPY4Q8N129 248 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 ARFGAP2Q8N6H7 521 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 PDCD7Q8N8D1 485 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 EPSTI1Q96J88 318 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 RABEP2Q9H5N1 569 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 MAP2P11137 1827 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 DIP2AQ14689 1571 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 B4GALNT4Q76KP1 1039 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 CCDC50Q8IVM0 306 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 CCDC63Q8NA47 563 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 ELP1O95163 1332 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
CPNE4-209ENST00000512055 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
CPNE4-209ENST00000512055 TLDC2A0PJX2 215 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 SNAP23O00161 211 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 USP17L21D6R901 530 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 RILPL1Q5EBL4 403 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 TEX11Q8IYF3 940 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 FTOQ9C0B1 505 aaKnown RBP eCLIP12.11□□□□□ -0.47
CPNE4-209ENST00000512055 SPATA31D1Q6ZQQ2 1576 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 NUCKS1Q9H1E3 243 aaKnown RBP12.11□□□□□ -0.47
CPNE4-209ENST00000512055 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-209ENST00000512055 USP21Q9UK80 565 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 POLR2DO15514 142 aaKnown RBP12.11□□□□□ -0.47
CPNE4-209ENST00000512055 CALML3P27482 149 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 PPARAQ07869 468 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
CPNE4-209ENST00000512055 HGSO14964 777 aaPredicted RBP12.1□□□□□ -0.47
CPNE4-209ENST00000512055 SATB1Q01826 763 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 PIK3AP1Q6ZUJ8 805 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 VPS54Q9P1Q0 977 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 CEP170BQ9Y4F5 1589 aaPredicted RBP12.1□□□□□ -0.47
CPNE4-209ENST00000512055 TRIM68Q6AZZ1 485 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 CCDC77Q9BR77 488 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 C1orf167Q5SNV9 1468 aa12.1□□□□□ -0.47
CPNE4-209ENST00000512055 EIF6P56537 245 aaKnown RBP12.1□□□□□ -0.47
CPNE4-209ENST00000512055 LRRC23Q53EV4 343 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms