RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 ZSWIM5Q9P217 1185 aa5.73□□□□□ -1.49
CPSF3-205ENST00000489629 FARP2O94887 1054 aaPredicted RBP5.72□□□□□ -1.49
CPSF3-205ENST00000489629 PLCG1P19174 1290 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 GARTP22102 1010 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 GDNFP39905 211 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 AFMP43652 599 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 MESP2Q0VG99 397 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 KCNMB1Q16558 191 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 CCDC27Q2M243 656 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 RELL1Q8IUW5 271 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 CYB5D2Q8WUJ1 264 aa5.72□□□□□ -1.49
CPSF3-205ENST00000489629 GZF1Q9H116 711 aaPredicted RBP5.72□□□□□ -1.49
CPSF3-205ENST00000489629 DUSP15Q9H1R2 295 aaPredicted RBP5.72□□□□□ -1.49
CPSF3-205ENST00000489629 POLR3KQ9Y2Y1 108 aaPredicted RBP5.72□□□□□ -1.49
CPSF3-205ENST00000489629 WASH4PA8MWX3 477 aa5.71□□□□□ -1.5
CPSF3-205ENST00000489629 SRFP11831 508 aa5.71□□□□□ -1.5
CPSF3-205ENST00000489629 FAM13CQ8NE31 585 aa5.71□□□□□ -1.5
CPSF3-205ENST00000489629 VTI1BQ9UEU0 232 aa5.71□□□□□ -1.5
CPSF3-205ENST00000489629 BPNT1O95861 308 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 GBP2P32456 591 aaPredicted RBP5.7□□□□□ -1.5
CPSF3-205ENST00000489629 PWP1Q13610 501 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 GAB4Q2WGN9 574 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 TMPRSS7Q7RTY8 843 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 ERMP1Q7Z2K6 904 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 SLFN12Q8IYM2 578 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 KIRREL1Q96J84 757 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 ALPK1Q96QP1 1244 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 GPR62Q9BZJ7 368 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 MRS2Q9HD23 443 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 KCNQ5Q9NR82 932 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 REV1Q9UBZ9 1251 aa5.7□□□□□ -1.5
CPSF3-205ENST00000489629 CHURC1-FNTBB4DL54 471 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 DNAJA2O60884 412 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 GLI1P08151 1106 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 YARSP54577 528 aaKnown RBP5.69□□□□□ -1.5
CPSF3-205ENST00000489629 FAM160A1Q05DH4 1040 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 MPP2Q14168 576 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 ZNF124Q15973 351 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 DIEXFQ68CQ4 756 aaKnown RBP5.69□□□□□ -1.5
CPSF3-205ENST00000489629 DTWD2Q8NBA8 298 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 FBXO27Q8NI29 283 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 LIN37Q96GY3 246 aaPredicted RBP5.69□□□□□ -1.5
CPSF3-205ENST00000489629 FAM53CQ9NYF3 392 aa5.69□□□□□ -1.5
CPSF3-205ENST00000489629 DNAJC25-GNG10A0A024R161 153 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 LRRC10BA6NIK2 292 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 MINDY4BA8MYZ0 360 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 LRRN2O75325 713 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 HTR3BO95264 441 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 MLANAQ16655 118 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 RALGPS1Q5JS13 557 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 FAM196AQ6ZSG2 479 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 REC114Q7Z4M0 266 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 GOLM1Q8NBJ4 401 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 CCDC120Q96HB5 630 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 FAM84AQ96KN4 292 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 TRIT1Q9H3H1 467 aaKnown RBP5.68□□□□□ -1.5
CPSF3-205ENST00000489629 COPRSQ9NQ92 184 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 KBTBD4Q9NVX7 518 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 SLAMF8Q9P0V8 285 aa5.68□□□□□ -1.5
CPSF3-205ENST00000489629 GRIN3BO60391 1043 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 GREM1O60565 184 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
CPSF3-205ENST00000489629 MRPL58Q14197 206 aaKnown RBP5.67□□□□□ -1.5
CPSF3-205ENST00000489629 TMEM67Q5HYA8 995 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 SNAP47Q5SQN1 464 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 FBXL19Q6PCT2 694 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 TTC6Q86TZ1 520 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 TSPYL5Q86VY4 417 aaPredicted RBP5.67□□□□□ -1.5
CPSF3-205ENST00000489629 CREG2Q8IUH2 290 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 BHLHE22Q8NFJ8 381 aaPredicted RBP5.67□□□□□ -1.5
CPSF3-205ENST00000489629 BAHD1Q8TBE0 780 aaPredicted RBP5.67□□□□□ -1.5
CPSF3-205ENST00000489629 VWCEQ96DN2 955 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 LRRC3Q9BY71 257 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 SP110Q9HB58 689 aa5.67□□□□□ -1.5
CPSF3-205ENST00000489629 ARID1BQ8NFD5 2236 aaPredicted RBP5.66□□□□□ -1.5
CPSF3-205ENST00000489629 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 ITGAEP38570 1179 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 ERVFC1P60507 584 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 PRR23BQ6ZRT6 265 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 CILP2Q8IUL8 1156 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 KSR1Q8IVT5 923 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 CCDC74BQ96LY2 380 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 KREMEN1Q96MU8 473 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 ADAMTS10Q9H324 1103 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 KLHL3Q9UH77 587 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 TMEM59LQ9UK28 342 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 KCNH3Q9ULD8 1083 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 ROBO2Q9HCK4 1378 aa5.66□□□□□ -1.5
CPSF3-205ENST00000489629 RBM47A0AV96 593 aaKnown RBP5.65□□□□□ -1.5
CPSF3-205ENST00000489629 HPXP02790 462 aa5.65□□□□□ -1.5
CPSF3-205ENST00000489629 KIF2CQ99661 725 aa5.65□□□□□ -1.5
CPSF3-205ENST00000489629 ASPNQ9BXN1 380 aa5.65□□□□□ -1.5
CPSF3-205ENST00000489629 GPATCH2Q9NW75 528 aa5.65□□□□□ -1.5
CPSF3-205ENST00000489629 SLC22A31A6NKX4 558 aa5.64□□□□□ -1.51
CPSF3-205ENST00000489629 TLR3O15455 904 aaKnown RBP5.64□□□□□ -1.51
CPSF3-205ENST00000489629 EIF4A3P38919 411 aaKnown RBP5.64□□□□□ -1.51
CPSF3-205ENST00000489629 ABHD4Q8TB40 342 aa5.64□□□□□ -1.51
CPSF3-205ENST00000489629 SLC38A3Q99624 504 aa5.64□□□□□ -1.51
CPSF3-205ENST00000489629 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms