RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, human

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQA1-206	ENST00000482745	FEZ1	Q99689	392 aa		12.02	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	CABP5	Q9NP86	173 aa		12.02	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GLRX3	O76003	335 aa	Known RBP	12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GNRH1	P01148	92 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GABPA	Q06546	454 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ZYX	Q15942	572 aa	Known RBP	12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	AMOTL1	Q8IY63	956 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SLC44A5	Q8NCS7	719 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	CYP2D7	A0A087X1C5	515 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	C19orf81	C9J6K1	198 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	MPHOSPH10	O00566	681 aa	Known RBP	12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	RNF113A	O15541	343 aa	Known RBP	12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TPM2	P07951	284 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	OSBP	P22059	807 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	FCGRT	P55899	365 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	IRX3	P78415	501 aa	Predicted RBP	12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	AAMP	Q13685	434 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	DYNLL2	Q96FJ2	89 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	FSD1	Q9BTV5	496 aa		12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.01	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	MYPN	Q86TC9	1320 aa		12	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	USP17L12	C9JPN9	530 aa		12	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	USP17L21	D6R901	530 aa		12	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	APPBP2	Q92624	585 aa		12	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	OSBP2	Q969R2	916 aa		12	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ARMC5	Q96C12	935 aa		12	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SRRD	Q9UH36	339 aa		12	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SMIM22	K7EJ46	135 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	MYC	P01106	439 aa	Predicted RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ZFY	P08048	801 aa	Predicted RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	HOXD10	P28358	340 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	MCM4	P33991	863 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SH3TC2	Q8TF17	1288 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	STRBP	Q96SI9	672 aa	Known RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SWAP70	Q9UH65	585 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SALL3	Q9BXA9	1300 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TNPO2	O14787	897 aa	Known RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TNRC18	O15417	2968 aa	Predicted RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	PRMT2	P55345	433 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	PRKCZ	Q05513	592 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SEPT2	Q15019	361 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	FAM110C	Q1W6H9	321 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	C12orf60	Q5U649	245 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	USP17L2	Q6R6M4	530 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	NBPF11	Q86T75	865 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	RAET1E	Q8TD07	263 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ACER1	Q8TDN7	264 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TBC1D32	Q96NH3	1257 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	RWDD1	Q9H446	243 aa	Predicted RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	EMILIN3	Q9NT22	766 aa		11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.99	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	BRCA2	P51587	3418 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745		M0R2C6	588 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GPAA1	O43292	621 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GUCY1A2	P33402	732 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GCLC	P48506	637 aa	Predicted RBP	11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ZNF333	Q96JL9	665 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	LNPK	Q9C0E8	428 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	ESPN	B1AK53	854 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	HOXA7	P31268	230 aa	Predicted RBP	11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	USP14	P54578	494 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	CTR9	Q6PD62	1173 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	P2RX7	Q99572	595 aa	Known RBP	11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	PANK2	Q9BZ23	570 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GABRQ	Q9UN88	632 aa		11.98	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	KIAA0100	Q14667	2235 aa	Known RBP	11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	POTEF	A5A3E0	1075 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	GSG1L2	A8MUP6	293 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	AKR1B1	P15121	316 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	CDK8	P49336	464 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	PDE1A	P54750	535 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	HERVK_113	P62684	666 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TMEM179	Q6ZVK1	233 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	STK11IP	Q8N1F8	1099 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	SEC62	Q99442	399 aa	Known RBP	11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	KIAA1683	Q9H0B3	1180 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	DOCK3	Q8IZD9	2030 aa		11.97	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	PEX10	O60683	326 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	IGHD	P01880	384 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	APP	P05067	770 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TDO2	P48775	406 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	C16orf86	Q6ZW13	317 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	CLEC10A	Q8IUN9	316 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	C12orf42	Q96LP6	360 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	PAGR1	Q9BTK6	254 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TMEM106C	Q9BVX2	250 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	PDCL3	Q9H2J4	239 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	TAOK2	Q9UL54	1235 aa		11.96	□□□□□ -0.49
HLA-DQA1-206	ENST00000482745	MINDY4B	A8MYZ0	360 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	SEC24B	O95487	1268 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	GNAT2	P19087	354 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	VCAM1	P19320	739 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	GRK4	P32298	578 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	FLT3LG	P49771	235 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	SMC5	Q8IY18	1101 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	COA7	Q96BR5	231 aa		11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.96	□□□□□ -0.5
HLA-DQA1-206	ENST00000482745	BIN2	Q9UBW5	565 aa	Predicted RBP	11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms