RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 KCNMB1Q16558 191 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 POU5F2Q8N7G0 328 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 FLAD1Q8NFF5 587 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 DNAJB8Q8NHS0 232 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 PIWIL2Q8TC59 973 aaKnown RBP6.93□□□□□ -1.3
ITGA6-209ENST00000470259 CYB5D2Q8WUJ1 264 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 KBTBD4Q9NVX7 518 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 REV1Q9UBZ9 1251 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 CTNND2Q9UQB3 1225 aa6.93□□□□□ -1.3
ITGA6-209ENST00000470259 TLR3O15455 904 aaKnown RBP6.92□□□□□ -1.3
ITGA6-209ENST00000470259 TMEM201Q5SNT2 666 aa6.92□□□□□ -1.3
ITGA6-209ENST00000470259 ZSWIM9Q86XI8 627 aa6.92□□□□□ -1.3
ITGA6-209ENST00000470259 TMEM40Q8WWA1 233 aa6.92□□□□□ -1.3
ITGA6-209ENST00000470259 COPRSQ9NQ92 184 aa6.92□□□□□ -1.3
ITGA6-209ENST00000470259 KCNH3Q9ULD8 1083 aa6.92□□□□□ -1.3
ITGA6-209ENST00000470259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
ITGA6-209ENST00000470259 CHURC1-FNTBB4DL54 471 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 MLECQ14165 292 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 MPP2Q14168 576 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 ZNF648Q5T619 568 aaPredicted RBP6.91□□□□□ -1.3
ITGA6-209ENST00000470259 CREG2Q8IUH2 290 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 PHACTR4Q8IZ21 702 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 FBXO27Q8NI29 283 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 CCDC120Q96HB5 630 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 TRIT1Q9H3H1 467 aaKnown RBP6.91□□□□□ -1.3
ITGA6-209ENST00000470259 SLAMF8Q9P0V8 285 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 GGT7Q9UJ14 662 aa6.91□□□□□ -1.3
ITGA6-209ENST00000470259 ZBTB7CA1YPR0 619 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 FARP2O94887 1054 aaPredicted RBP6.9□□□□□ -1.3
ITGA6-209ENST00000470259 HTR3BO95264 441 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 TPP2P29144 1249 aaPredicted RBP6.9□□□□□ -1.3
ITGA6-209ENST00000470259 FYB2Q5VWT5 728 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 FAM196AQ6ZSG2 479 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 TMPRSS7Q7RTY8 843 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 REC114Q7Z4M0 266 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 PPP1R13LQ8WUF5 828 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 KIRREL1Q96J84 757 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 CCDC74BQ96LY2 380 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 Q96M66 194 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 ALPK1Q96QP1 1244 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.3
ITGA6-209ENST00000470259 POLR3KQ9Y2Y1 108 aaPredicted RBP6.9□□□□□ -1.3
ITGA6-209ENST00000470259 LRRC10BA6NIK2 292 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 WASH4PA8MWX3 477 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 C8AP07357 584 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 GBP1P32455 592 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
ITGA6-209ENST00000470259 CWF19L2Q2TBE0 894 aaKnown RBP6.89□□□□□ -1.31
ITGA6-209ENST00000470259 TMEM67Q5HYA8 995 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 TMCO4Q5TGY1 634 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 TTC6Q86TZ1 520 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 SLFN12Q8IYM2 578 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 BAHD1Q8TBE0 780 aaPredicted RBP6.89□□□□□ -1.31
ITGA6-209ENST00000470259 FAM53CQ9NYF3 392 aa6.89□□□□□ -1.31
ITGA6-209ENST00000470259 SUPT16HQ9Y5B9 1047 aaKnown RBP6.89□□□□□ -1.31
ITGA6-209ENST00000470259 PRR36Q9H6K5 1346 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 GARTP22102 1010 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 GDNFP39905 211 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 MLANAQ16655 118 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 MPZL3Q6UWV2 235 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 HS2ST1Q7LGA3 356 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 ERMP1Q7Z2K6 904 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 KSR1Q8IVT5 923 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 SLC38A3Q99624 504 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 KIF2CQ99661 725 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 DUSP15Q9H1R2 295 aaPredicted RBP6.88□□□□□ -1.31
ITGA6-209ENST00000470259 DUSP13Q9UII6 198 aa6.88□□□□□ -1.31
ITGA6-209ENST00000470259 ROBO2Q9HCK4 1378 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 LRRN2O75325 713 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 RAC2P15153 192 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 HK2P52789 917 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 PKN1Q16512 942 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 DTWD2Q8NBA8 298 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 ZNF296Q8WUU4 475 aaPredicted RBP6.87□□□□□ -1.31
ITGA6-209ENST00000470259 RNF141Q8WVD5 230 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 SYTL4Q96C24 671 aaPredicted RBP6.87□□□□□ -1.31
ITGA6-209ENST00000470259 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
ITGA6-209ENST00000470259 KREMEN1Q96MU8 473 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 BRMS1Q9HCU9 246 aa6.87□□□□□ -1.31
ITGA6-209ENST00000470259 DNAJC25-GNG10A0A024R161 153 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 BTBD11A6QL63 1104 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 ESR1P03372 595 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 GLI1P08151 1106 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 LTKP29376 864 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 ZNF124Q15973 351 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 CLEC16AQ2KHT3 1053 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 RALGPS1Q5JS13 557 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 PCDHB14Q9Y5E9 798 aa6.86□□□□□ -1.31
ITGA6-209ENST00000470259 ZNF503-AS2A6NEH8 195 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 RAG1P15918 1043 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 MCM4P33991 863 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 EGR3Q06889 387 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 MRPL58Q14197 206 aaKnown RBP6.85□□□□□ -1.31
ITGA6-209ENST00000470259 SEZ6Q53EL9 994 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 ARSHQ5FYA8 562 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms