RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 SLC38A3Q99624 504 aa7.52□□□□□ -1.21
ITGB1-208ENST00000464001 CORINQ9Y5Q5 1042 aa7.52□□□□□ -1.21
ITGB1-208ENST00000464001 FAM221AA4D161 298 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 LRRC10BA6NIK2 292 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 F6X3S4 739 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 PKN1Q16512 942 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 TMEM201Q5SNT2 666 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 CYB5D2Q8WUJ1 264 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 KIRREL1Q96J84 757 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 ALPK1Q96QP1 1244 aa7.51□□□□□ -1.21
ITGB1-208ENST00000464001 GZF1Q9H116 711 aaPredicted RBP7.51□□□□□ -1.21
ITGB1-208ENST00000464001 F13A1P00488 732 aa7.5□□□□□ -1.21
ITGB1-208ENST00000464001 GLI1P08151 1106 aa7.5□□□□□ -1.21
ITGB1-208ENST00000464001 TAGLNQ01995 201 aaKnown RBP7.5□□□□□ -1.21
ITGB1-208ENST00000464001 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
ITGB1-208ENST00000464001 FYB2Q5VWT5 728 aa7.5□□□□□ -1.21
ITGB1-208ENST00000464001 FAM84AQ96KN4 292 aa7.5□□□□□ -1.21
ITGB1-208ENST00000464001 RHOVQ96L33 236 aa7.5□□□□□ -1.21
ITGB1-208ENST00000464001 TRIT1Q9H3H1 467 aaKnown RBP7.5□□□□□ -1.21
ITGB1-208ENST00000464001 KCNH3Q9ULD8 1083 aa7.5□□□□□ -1.21
ITGB1-208ENST00000464001 ZNF503-AS2A6NEH8 195 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 UPK3BL1B0FP48 263 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 UPK3BL2E5RIL1 263 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 JAG1P78504 1218 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 MLANAQ16655 118 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 PPP1R13LQ8WUF5 828 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 Q96M66 194 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 SLAMF8Q9P0V8 285 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 PRR36Q9H6K5 1346 aa7.49□□□□□ -1.21
ITGB1-208ENST00000464001 MINDY4BA8MYZ0 360 aa7.48□□□□□ -1.21
ITGB1-208ENST00000464001 SNAP47Q5SQN1 464 aa7.48□□□□□ -1.21
ITGB1-208ENST00000464001 MPZL3Q6UWV2 235 aa7.48□□□□□ -1.21
ITGB1-208ENST00000464001 SLFN12Q8IYM2 578 aa7.48□□□□□ -1.21
ITGB1-208ENST00000464001 DUSP15Q9H1R2 295 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-208ENST00000464001 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
ITGB1-208ENST00000464001 GPATCH2Q9NW75 528 aa7.48□□□□□ -1.21
ITGB1-208ENST00000464001 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.48□□□□□ -1.21
ITGB1-208ENST00000464001 ESR1P03372 595 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 RAC2P15153 192 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 TPP2P29144 1249 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-208ENST00000464001 TNNI2P48788 182 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 MPP2Q14168 576 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 ZNF124Q15973 351 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 TTC6Q86TZ1 520 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 CREG2Q8IUH2 290 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 GOLM1Q8NBJ4 401 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 LIN37Q96GY3 246 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-208ENST00000464001 GPR62Q9BZJ7 368 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 REV1Q9UBZ9 1251 aa7.47□□□□□ -1.21
ITGB1-208ENST00000464001 DBX1A6NMT0 343 aa7.46□□□□□ -1.22
ITGB1-208ENST00000464001 FAM160A1Q05DH4 1040 aa7.46□□□□□ -1.22
ITGB1-208ENST00000464001 MESP2Q0VG99 397 aa7.46□□□□□ -1.22
ITGB1-208ENST00000464001 BHLHE22Q8NFJ8 381 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-208ENST00000464001 RNF141Q8WVD5 230 aa7.46□□□□□ -1.22
ITGB1-208ENST00000464001 CCDC74BQ96LY2 380 aa7.46□□□□□ -1.22
ITGB1-208ENST00000464001 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
ITGB1-208ENST00000464001 KLHL3Q9UH77 587 aa7.46□□□□□ -1.22
ITGB1-208ENST00000464001 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.45□□□□□ -1.22
ITGB1-208ENST00000464001 RBAK-RBAKDNI3L0D1 243 aa7.45□□□□□ -1.22
ITGB1-208ENST00000464001 HTR3BO95264 441 aa7.45□□□□□ -1.22
ITGB1-208ENST00000464001 MLECQ14165 292 aa7.45□□□□□ -1.22
ITGB1-208ENST00000464001 DTWD2Q8NBA8 298 aa7.45□□□□□ -1.22
ITGB1-208ENST00000464001 TMEM59LQ9UK28 342 aa7.45□□□□□ -1.22
ITGB1-208ENST00000464001 POLR3KQ9Y2Y1 108 aaPredicted RBP7.45□□□□□ -1.22
ITGB1-208ENST00000464001 ARID1BQ8NFD5 2236 aaPredicted RBP7.45□□□□□ -1.22
ITGB1-208ENST00000464001 ROBO2Q9HCK4 1378 aa7.45□□□□□ -1.22
ITGB1-208ENST00000464001 DNAJC25-GNG10A0A024R161 153 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 WASH4PA8MWX3 477 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 CHURC1-FNTBB4DL54 471 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 GRIN3BO60391 1043 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 SRFP11831 508 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 CHMP4BP1P59074 171 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 GAB4Q2WGN9 574 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 ZNF326Q5BKZ1 582 aaKnown RBP7.44□□□□□ -1.22
ITGB1-208ENST00000464001 RALGPS1Q5JS13 557 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 REC114Q7Z4M0 266 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 TSPYL5Q86VY4 417 aaPredicted RBP7.44□□□□□ -1.22
ITGB1-208ENST00000464001 ABHD4Q8TB40 342 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 KBTBD4Q9NVX7 518 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 DUSP13Q9UII6 198 aa7.44□□□□□ -1.22
ITGB1-208ENST00000464001 GARTP22102 1010 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 PRR23BQ6ZRT6 265 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 FAM196AQ6ZSG2 479 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 ERMP1Q7Z2K6 904 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 PHACTR4Q8IZ21 702 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 BAHD1Q8TBE0 780 aaPredicted RBP7.43□□□□□ -1.22
ITGB1-208ENST00000464001 MYLIPQ8WY64 445 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 SYTL4Q96C24 671 aaPredicted RBP7.43□□□□□ -1.22
ITGB1-208ENST00000464001 KREMEN1Q96MU8 473 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 BCL2L13Q9BXK5 485 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 ASPNQ9BXN1 380 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 ADAMTS10Q9H324 1103 aa7.43□□□□□ -1.22
ITGB1-208ENST00000464001 LRRN2O75325 713 aa7.42□□□□□ -1.22
ITGB1-208ENST00000464001 GBP1P32455 592 aa7.42□□□□□ -1.22
ITGB1-208ENST00000464001 HK2P52789 917 aa7.42□□□□□ -1.22
ITGB1-208ENST00000464001 EGR3Q06889 387 aa7.42□□□□□ -1.22
ITGB1-208ENST00000464001 CWF19L2Q2TBE0 894 aaKnown RBP7.42□□□□□ -1.22
ITGB1-208ENST00000464001 FBXO27Q8NI29 283 aa7.42□□□□□ -1.22
ITGB1-208ENST00000464001 SUPT16HQ9Y5B9 1047 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms