RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 PALD1Q9ULE6 856 aa18.69■□□□□ 0.58
SF3A3-203ENST00000461869 FLT1P17948 1338 aa18.69■□□□□ 0.58
SF3A3-203ENST00000461869 ERC2O15083 957 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 GDF11O95390 407 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 MAPK4P31152 587 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 MAGEA10P43363 369 aaPredicted RBP18.68■□□□□ 0.58
SF3A3-203ENST00000461869 SHROOM1Q2M3G4 852 aaPredicted RBP18.68■□□□□ 0.58
SF3A3-203ENST00000461869 TNNI3KQ59H18 835 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 CCDC158Q5M9N0 1113 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 GPR153Q6NV75 609 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 TRMT44Q8IYL2 757 aaKnown RBP18.68■□□□□ 0.58
SF3A3-203ENST00000461869 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
SF3A3-203ENST00000461869 GINM1Q9NU53 330 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 FPGT-TNNI3KV9GXZ4 949 aa18.68■□□□□ 0.58
SF3A3-203ENST00000461869 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
SF3A3-203ENST00000461869 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
SF3A3-203ENST00000461869 ERVK-9P63128 1117 aa18.67■□□□□ 0.58
SF3A3-203ENST00000461869 ERVK-24P63145 666 aa18.67■□□□□ 0.58
SF3A3-203ENST00000461869 Q3C1V9 767 aa18.67■□□□□ 0.58
SF3A3-203ENST00000461869 ADGRA1Q86SQ6 560 aa18.67■□□□□ 0.58
SF3A3-203ENST00000461869 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
SF3A3-203ENST00000461869 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
SF3A3-203ENST00000461869 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
SF3A3-203ENST00000461869 DDX60LQ5H9U9 1706 aaKnown RBP18.66■□□□□ 0.58
SF3A3-203ENST00000461869 CYP2E1P05181 493 aaPredicted RBP18.66■□□□□ 0.58
SF3A3-203ENST00000461869 HLA-DOAP06340 250 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 RGS2P41220 211 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 CACNB2Q08289 660 aaPredicted RBP18.66■□□□□ 0.58
SF3A3-203ENST00000461869 LRIT3Q3SXY7 679 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 GPR142Q7Z601 462 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 DEFB123Q8N688 67 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 GTF3C2Q8WUA4 911 aaPredicted RBP18.66■□□□□ 0.58
SF3A3-203ENST00000461869 PAGR1Q9BTK6 254 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 PORCNQ9H237 461 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 PFASO15067 1338 aa18.66■□□□□ 0.58
SF3A3-203ENST00000461869 SIPA1L1O43166 1804 aa18.65■□□□□ 0.58
SF3A3-203ENST00000461869 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
SF3A3-203ENST00000461869 GLRX3O76003 335 aaKnown RBP18.65■□□□□ 0.58
SF3A3-203ENST00000461869 USP17L2Q6R6M4 530 aa18.65■□□□□ 0.58
SF3A3-203ENST00000461869 PLEKHH3Q7Z736 793 aa18.65■□□□□ 0.58
SF3A3-203ENST00000461869 TDHQ8IZJ6 230 aa18.65■□□□□ 0.58
SF3A3-203ENST00000461869 USP6NLQ92738 828 aa18.65■□□□□ 0.58
SF3A3-203ENST00000461869 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
SF3A3-203ENST00000461869 BACH2Q9BYV9 841 aa18.65■□□□□ 0.58
SF3A3-203ENST00000461869 UBE2OQ9C0C9 1292 aaKnown RBP18.65■□□□□ 0.58
SF3A3-203ENST00000461869 EMILIN3Q9NT22 766 aa18.65■□□□□ 0.58
SF3A3-203ENST00000461869 CCND3P30281 292 aaPredicted RBP18.64■□□□□ 0.57
SF3A3-203ENST00000461869 ZAP70P43403 619 aa18.64■□□□□ 0.57
SF3A3-203ENST00000461869 CCL14Q16627 93 aa18.64■□□□□ 0.57
SF3A3-203ENST00000461869 C8orf34Q49A92 452 aa18.64■□□□□ 0.57
SF3A3-203ENST00000461869 MORN1Q5T089 497 aa18.64■□□□□ 0.57
SF3A3-203ENST00000461869 CWC22Q9HCG8 908 aaKnown RBP18.64■□□□□ 0.57
SF3A3-203ENST00000461869 IGSF3O75054 1194 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 GH2P01242 217 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 COL6A1P12109 1028 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
SF3A3-203ENST00000461869 CYP7A1P22680 504 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 DYNLL1P63167 89 aaKnown RBP18.63■□□□□ 0.57
SF3A3-203ENST00000461869 LHX8Q68G74 356 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 POTEEQ6S8J3 1075 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 Q7L0L9 218 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 ZNF512BQ96KM6 892 aaPredicted RBP18.63■□□□□ 0.57
SF3A3-203ENST00000461869 APBA2Q99767 749 aa18.63■□□□□ 0.57
SF3A3-203ENST00000461869 PIH1D3Q9NQM4 214 aaKnown RBP18.63■□□□□ 0.57
SF3A3-203ENST00000461869 ZYXQ15942 572 aaKnown RBP18.62■□□□□ 0.57
SF3A3-203ENST00000461869 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
SF3A3-203ENST00000461869 FEZ1Q99689 392 aa18.62■□□□□ 0.57
SF3A3-203ENST00000461869 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
SF3A3-203ENST00000461869 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
SF3A3-203ENST00000461869 CDC45O75419 566 aa18.61■□□□□ 0.57
SF3A3-203ENST00000461869 MAP2K5Q13163 448 aa18.61■□□□□ 0.57
SF3A3-203ENST00000461869 LRRC26Q2I0M4 334 aa18.61■□□□□ 0.57
SF3A3-203ENST00000461869 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
SF3A3-203ENST00000461869 EDC3Q96F86 508 aaKnown RBP18.61■□□□□ 0.57
SF3A3-203ENST00000461869 RABGAP1Q9Y3P9 1069 aa18.61■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L15C9J2P7 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L13C9JLJ4 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L11C9JVI0 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L18D6R9N7 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L22D6RA61 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L17D6RBQ6 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L19D6RCP7 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L20D6RJB6 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP5P45974 858 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 CCNA1P78396 465 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 USP17L24Q0WX57 530 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 MIGA1Q8NAN2 632 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 C12orf42Q96LP6 360 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 MTMR10Q9NXD2 777 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 DBNLQ9UJU6 430 aaKnown RBP18.6■□□□□ 0.57
SF3A3-203ENST00000461869 STXBP5LQ9Y2K9 1186 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 NDUFB9Q9Y6M9 179 aa18.6■□□□□ 0.57
SF3A3-203ENST00000461869 LAMA3Q16787 3333 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 CNMDO75829 334 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
SF3A3-203ENST00000461869 SDSP20132 328 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 MDM2Q00987 491 aaPredicted RBP18.59■□□□□ 0.57
SF3A3-203ENST00000461869 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
SF3A3-203ENST00000461869 WDR78Q5VTH9 848 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms