RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 RBPJLQ9UBG7 517 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 CDK5RAP2Q96SN8 1893 aa16.62■□□□□ 0.25
SCAMP4-206ENST00000460767 ZNF236Q9UL36 1845 aa16.61■□□□□ 0.25
SCAMP4-206ENST00000460767 TTC39AQ5SRH9 613 aa16.61■□□□□ 0.25
SCAMP4-206ENST00000460767 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-206ENST00000460767 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
SCAMP4-206ENST00000460767 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
SCAMP4-206ENST00000460767 RLFQ13129 1914 aa16.6■□□□□ 0.25
SCAMP4-206ENST00000460767 ZAP70P43403 619 aa16.6■□□□□ 0.25
SCAMP4-206ENST00000460767 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-206ENST00000460767 PIH1D3Q9NQM4 214 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-206ENST00000460767 USP17L10C9JJH3 530 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 CCL14Q16627 93 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 PLEKHH3Q7Z736 793 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 EXOC6Q8TAG9 804 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 PORCNQ9H237 461 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 PRDM6Q9NQX0 595 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 SALL3Q9BXA9 1300 aa16.59■□□□□ 0.25
SCAMP4-206ENST00000460767 DNM1LO00429 736 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 IGHA2P01877 340 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 HOXC6P09630 235 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 ATP5JP18859 108 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 LPAR1Q92633 364 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 ANTXR1Q9H6X2 564 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 DNAJC18Q9H819 358 aa16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 DDX20Q9UHI6 824 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-206ENST00000460767 TMEM265A0A087WTH1 108 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 APBB1O00213 710 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 SMARCA5O60264 1052 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 PPP4CP60510 307 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 Q3C1V9 767 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 FOXP4Q8IVH2 680 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 TEX11Q8IYF3 940 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 RABGAP1Q9Y3P9 1069 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 NDUFB9Q9Y6M9 179 aa16.57■□□□□ 0.24
SCAMP4-206ENST00000460767 GLRX3O76003 335 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 PLCG2P16885 1265 aa16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 SMAD3P84022 425 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 MFSD14CQ5VZR4 134 aa16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 MAFAQ8NHW3 353 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 PRKAG2Q9UGJ0 569 aa16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 ZBTB21Q9ULJ3 1066 aa16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 MYH7P12883 1935 aa16.56■□□□□ 0.24
SCAMP4-206ENST00000460767 SLC15A5A6NIM6 579 aa16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 PEX10O60683 326 aa16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 CCNA1P78396 465 aa16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 JAG1P78504 1218 aa16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 SNX17Q15036 470 aa16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 CCAR1Q8IX12 1150 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 SYMPKQ92797 1274 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 HAUS7Q99871 368 aa16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 SENP6Q9GZR1 1112 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 EMILIN3Q9NT22 766 aa16.55■□□□□ 0.24
SCAMP4-206ENST00000460767 FLT1P17948 1338 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 GRB14Q14449 540 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 C1orf53Q5VUE5 145 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 SH3RF3Q8TEJ3 882 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 FAM161BQ96MY7 647 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 SEMA6BQ9H3T3 888 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 FLRT1Q9NZU1 646 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
SCAMP4-206ENST00000460767 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 TCRBV5S4A2TA0A5A2 114 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 CNMDO75829 334 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 BAG3O95817 575 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 CYBAP13498 195 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 PTPREP23469 700 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 RTP1P59025 263 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 NAA16Q6N069 864 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 PAGR1Q9BTK6 254 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 RAI14Q9P0K7 980 aa16.53■□□□□ 0.24
SCAMP4-206ENST00000460767 IGHDP01880 384 aa16.52■□□□□ 0.24
SCAMP4-206ENST00000460767 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
SCAMP4-206ENST00000460767 OTUD7AQ8TE49 926 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-206ENST00000460767 ECHDC1Q9NTX5 307 aa16.52■□□□□ 0.24
SCAMP4-206ENST00000460767 SPTBN5Q9NRC6 3674 aaKnown RBP16.52■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L15C9J2P7 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L13C9JLJ4 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L11C9JVI0 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L18D6R9N7 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L22D6RA61 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L17D6RBQ6 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L19D6RCP7 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L20D6RJB6 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 USP17L24Q0WX57 530 aa16.51■□□□□ 0.23
SCAMP4-206ENST00000460767 TTF1Q15361 905 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms