RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 SNRKQ9NRH2 765 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 IFT57Q9NWB7 429 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 GOLGA6AQ9NYA3 693 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 AKAP2Q9Y2D5 859 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 LRRC9Q6ZRR7 1453 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 GPRASP1Q5JY77 1395 aa6.44□□□□□ -1.38
HMGB4-202ENST00000458277 RTEL1-TNFRSF6BF6WH68 1400 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 CASKIN1Q8WXD9 1431 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 NKTRP30414 1462 aaKnown RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 PDLIM1O00151 329 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 APBB1O00213 710 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 SSFA2P28290 1259 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 CDC25BP30305 580 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 SLC8A1P32418 973 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 LMAN1P49257 510 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 EPHA4P54764 986 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 SESN3P58005 492 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 G3BP1Q13283 466 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 SMC1AQ14683 1233 aaKnown RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 TAF7Q15545 349 aaPredicted RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 C1orf53Q5VUE5 145 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 NCAPG2Q86XI2 1143 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 FAM177A1Q8N128 213 aaPredicted RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 POU5F2Q8N7G0 328 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 CEP112Q8N8E3 955 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 GBP7Q8N8V2 638 aaPredicted RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 ZNF396Q96N95 335 aaPredicted RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 OSBPL9Q96SU4 736 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 KRTAP17-1Q9BYP8 105 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 TRIM7Q9C029 511 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 ARFGAP3Q9NP61 516 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 FRRS1LQ9P0K9 344 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 SUN2Q9UH99 717 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 MCM8Q9UJA3 840 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 ADAM21Q9UKJ8 722 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 ODF2LQ9ULJ1 636 aa6.43□□□□□ -1.38
HMGB4-202ENST00000458277 EPRSP07814 1512 aaKnown RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 SOS1Q07889 1333 aaPredicted RBP6.43□□□□□ -1.38
HMGB4-202ENST00000458277 POLR3GO15318 223 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 DHX15O43143 795 aaKnown RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 KCNJ6P48051 423 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 SH3BGRP55822 239 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 MLLT1Q03111 559 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 RASA3Q14644 834 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 PLCB4Q15147 1175 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 PREPLQ4J6C6 727 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 NAIF1Q69YI7 327 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 ABI1Q8IZP0 508 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 ACRBPQ8NEB7 543 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 HDAC7Q8WUI4 952 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 LZICQ8WZA0 190 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 SMARCE1Q969G3 411 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 RSRC1Q96IZ7 334 aaKnown RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 UBL7Q96S82 380 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 POLR3CQ9BUI4 534 aaPredicted RBP6.42□□□□□ -1.38
HMGB4-202ENST00000458277 GBP3Q9H0R5 595 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 ATP6V1DQ9Y5K8 247 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 HECW1Q76N89 1606 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 PARD3Q8TEW0 1356 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 MAP3K5Q99683 1374 aa6.42□□□□□ -1.38
HMGB4-202ENST00000458277 PRR19A6NJB7 356 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 EFCAB8A8MWE9 144 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 SRGAP3O43295 1099 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 KIF5CO60282 957 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 IGHDP01880 384 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 VDRP11473 427 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 MX1P20591 662 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 GPTP24298 496 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 OAS2P29728 719 aaKnown RBP6.41□□□□□ -1.38
HMGB4-202ENST00000458277 HNRNPH1P31943 449 aaKnown RBP6.41□□□□□ -1.38
HMGB4-202ENST00000458277 GCKP35557 465 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 ARHGAP25P42331 645 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 CCT2P78371 535 aaKnown RBP6.41□□□□□ -1.38
HMGB4-202ENST00000458277 IFFO1Q0D2I5 559 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 PSMD2Q13200 908 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 CCINQ13939 588 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 ACBD5Q5T8D3 534 aaPredicted RBP6.41□□□□□ -1.38
HMGB4-202ENST00000458277 HHATQ5VTY9 493 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 CYB5RLQ6IPT4 315 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 ZNF280DQ6N043 979 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 B4GALNT4Q76KP1 1039 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 BTLAQ7Z6A9 289 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 TAX1BP1Q86VP1 789 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 MFN1Q8IWA4 741 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 AMOTL1Q8IY63 956 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 OGFOD1Q8N543 542 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 N4BP2L2Q92802 583 aaPredicted RBP6.41□□□□□ -1.38
HMGB4-202ENST00000458277 MAF1Q9H063 256 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 L2HGDHQ9H9P8 463 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 TMEM63CQ9P1W3 806 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 SWAP70Q9UH65 585 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 LCMT1Q9UIC8 334 aa6.41□□□□□ -1.38
HMGB4-202ENST00000458277 PLXNC1O60486 1568 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 FAM177BA6PVY3 158 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 EBAG9O00559 213 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 LIN7AO14910 233 aaPredicted RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 ERC2O15083 957 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 AHCYL1O43865 530 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 RTN3O95197 1032 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms