RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 RMDN1Q96DB5 314 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 MTIF3Q9H2K0 278 aaKnown RBP9.07□□□□□ -0.96
UBE2F-204ENST00000409953 ALG13Q9NP73 1137 aaKnown RBP9.07□□□□□ -0.96
UBE2F-204ENST00000409953 FLRT1Q9NZU1 646 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 DMDP11532 3685 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
UBE2F-204ENST00000409953 MAPK4P31152 587 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 FAAP100Q0VG06 881 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 MFSD10Q14728 455 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 PKN1Q16512 942 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 C15orf52Q6ZUT6 534 aaKnown RBP9.06□□□□□ -0.96
UBE2F-204ENST00000409953 GPR142Q7Z601 462 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 TRPV1Q8NER1 839 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 TDRD7Q8NHU6 1098 aaKnown RBP9.06□□□□□ -0.96
UBE2F-204ENST00000409953 PBXIP1Q96AQ6 731 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 BCL11AQ9H165 835 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 ASCC2Q9H1I8 757 aaPredicted RBP9.06□□□□□ -0.96
UBE2F-204ENST00000409953 CHPF2Q9P2E5 772 aa9.06□□□□□ -0.96
UBE2F-204ENST00000409953 TRIOO75962 3097 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 KMT2EQ8IZD2 1858 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 KCNA5P22460 613 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 CYP2C19P33261 490 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 CHRNDQ07001 517 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 PABPC4Q13310 644 aaKnown RBP eCLIP9.05□□□□□ -0.963e-6■■■■□ 23.1
UBE2F-204ENST00000409953 LRRC41Q15345 812 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 BMP8AQ7Z5Y6 402 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 CCDC84Q86UT8 332 aaPredicted RBP9.05□□□□□ -0.96
UBE2F-204ENST00000409953 PROCA1Q8NCQ7 364 aaPredicted RBP9.05□□□□□ -0.96
UBE2F-204ENST00000409953 TTLL11Q8NHH1 800 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 FSD1Q9BTV5 496 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.05□□□□□ -0.96
UBE2F-204ENST00000409953 DBF4Q9UBU7 674 aaPredicted RBP9.05□□□□□ -0.96
UBE2F-204ENST00000409953 TSPYL4Q9UJ04 414 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 PCDHA11Q9Y5I1 949 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 PHIPQ8WWQ0 1821 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 ZNF536O15090 1300 aa9.05□□□□□ -0.96
UBE2F-204ENST00000409953 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 DCDC2CA8MYV0 355 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 H0Y858 1186 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 TAF5LO75529 589 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 CYBAP13498 195 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 ZP2Q05996 745 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 TCP10Q12799 353 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 GRIK5Q16478 980 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 PLEKHH3Q7Z736 793 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 CCAR1Q8IX12 1150 aaKnown RBP9.04□□□□□ -0.96
UBE2F-204ENST00000409953 ADSSL1Q8N142 457 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 TMEM199Q8N511 208 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 GPRC5AQ8NFJ5 357 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 FAM151AQ8WW52 585 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 ARNTL2Q8WYA1 636 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 TEKT1Q969V4 418 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 PORCNQ9H237 461 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 TXNRD2Q9NNW7 524 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
UBE2F-204ENST00000409953 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 MUTYHQ9UIF7 546 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 TBX21Q9UL17 535 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 PHF24Q9UPV7 400 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 LOC285556D6RIA3 1793 aa9.04□□□□□ -0.96
UBE2F-204ENST00000409953 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.03□□□□□ -0.96
UBE2F-204ENST00000409953 TMEM221A6NGB7 291 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 M0R296 226 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 CA3P07451 260 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 ATP2B2Q01814 1243 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 GRB10Q13322 594 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 OTOP2Q7RTS6 562 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 ANKRD33Q7Z3H0 272 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 EDC3Q96F86 508 aaKnown RBP9.03□□□□□ -0.96
UBE2F-204ENST00000409953 MPHOSPH8Q99549 860 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 UPF3BQ9BZI7 483 aaKnown RBP9.03□□□□□ -0.96
UBE2F-204ENST00000409953 CWC22Q9HCG8 908 aaKnown RBP9.03□□□□□ -0.96
UBE2F-204ENST00000409953 WDR70Q9NW82 654 aa9.03□□□□□ -0.96
UBE2F-204ENST00000409953 DOCK1Q14185 1865 aa9.02□□□□□ -0.96
UBE2F-204ENST00000409953 FGBP02675 491 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 IRS1P35568 1242 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
UBE2F-204ENST00000409953 HDLBPQ00341 1268 aaKnown RBP9.02□□□□□ -0.97
UBE2F-204ENST00000409953 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
UBE2F-204ENST00000409953 FAM47AQ5JRC9 791 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 APOBEC3HQ6NTF7 200 aaKnown RBP9.02□□□□□ -0.97
UBE2F-204ENST00000409953 FBXL6Q8N531 539 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 CCDC191Q8NCU4 936 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 ZDHHC15Q96MV8 337 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 TOX2Q96NM4 488 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 MYD88Q99836 296 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
UBE2F-204ENST00000409953 IL23AQ9NPF7 189 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 CWC25Q9NXE8 425 aaPredicted RBP9.02□□□□□ -0.97
UBE2F-204ENST00000409953 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
UBE2F-204ENST00000409953 FLNBO75369 2602 aaKnown RBP9.02□□□□□ -0.97
UBE2F-204ENST00000409953 COL4A4P53420 1690 aaPredicted RBP9.01□□□□□ -0.97
UBE2F-204ENST00000409953 ZNF292O60281 2723 aa9.01□□□□□ -0.97
UBE2F-204ENST00000409953 A0A1W2PQ45 241 aaPredicted RBP9.01□□□□□ -0.97
UBE2F-204ENST00000409953 A0A1W2PQY0 241 aa9.01□□□□□ -0.97
UBE2F-204ENST00000409953 MAST4O15021 2626 aa9.01□□□□□ -0.97
UBE2F-204ENST00000409953 SEPT4O43236 478 aa9.01□□□□□ -0.97
UBE2F-204ENST00000409953 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms