RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 TRIM74Q86UV6 250 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 TRIM73Q86UV7 250 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 IQCF2Q8IXL9 164 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 AGAP3Q96P47 875 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 MYD88Q99836 296 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 POLR3CQ9BUI4 534 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 METTL22Q9BUU2 404 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 NSFL1CQ9UNZ2 370 aaKnown RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 CDHR2Q9BYE9 1310 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 ARFGEF2Q9Y6D5 1785 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 DLG5Q8TDM6 1919 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 COL4A5P29400 1685 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 KINO60870 393 aaKnown RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 RAD17O75943 681 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 PCCAP05165 728 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 VDRP11473 427 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 GYS2P54840 703 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 KCNH2Q12809 1159 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 BECN1Q14457 450 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 CCDC152Q4G0S7 254 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 TBC1D10BQ4KMP7 808 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 HS1BP3Q53T59 392 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 PLEKHM2Q8IWE5 1019 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 MICALL1Q8N3F8 863 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 SMCR8Q8TEV9 937 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 C17orf50Q8WW18 174 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 PRIMPOLQ96LW4 560 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 EYA3Q99504 573 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 STK31Q9BXU1 1019 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 IQCGQ9H095 443 aaKnown RBP7.13□□□□□ -1.27
CLIP4-202ENST00000401605 SEPT3Q9UH03 358 aa7.13□□□□□ -1.27
CLIP4-202ENST00000401605 RASSF10A6NK89 507 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 LGR5O75473 907 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 NBPF7P0C2Y1 421 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 HSD3B2P26439 372 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 GMPSP49915 693 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 ATP2B3Q16720 1220 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 AP1ARQ63HQ0 302 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 CAPN12Q6ZSI9 719 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 TAX1BP1Q86VP1 789 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 TSPYL6Q8N831 410 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 RNF34Q969K3 372 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 VEZTQ9HBM0 779 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 MRS2Q9HD23 443 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 OGFRQ9NZT2 677 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 DNMT3AQ9Y6K1 912 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 C6orf229H3BNL8 230 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 PDE8AO60658 829 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 CCDC175P0C221 793 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 TRPC1P48995 793 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 VEGFBP49765 207 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 COL19A1Q14993 1142 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 OCLNQ16625 522 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 DEFB115Q30KQ5 88 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 RNF187Q5TA31 235 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 KSR2Q6VAB6 950 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 HSCBQ8IWL3 235 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 SAMD3Q8N6K7 520 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 GTF3C2Q8WUA4 911 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 TSR2Q969E8 191 aaKnown RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 TACO1Q9BSH4 297 aaKnown RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 RSPH9Q9H1X1 276 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 FBXO9Q9UK97 447 aaPredicted RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 ABT1Q9ULW3 272 aaKnown RBP7.12□□□□□ -1.27
CLIP4-202ENST00000401605 MAP3K2Q9Y2U5 619 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 JRKLQ9Y4A0 524 aa7.12□□□□□ -1.27
CLIP4-202ENST00000401605 RCCD1A6NED2 376 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 YDJCA8MPS7 323 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 ECEL1O95672 775 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 GPSM2P81274 684 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 CCDC173Q0VFZ6 552 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 CHAF1AQ13111 956 aaPredicted RBP7.11□□□□□ -1.27
CLIP4-202ENST00000401605 SWI5Q1ZZU3 235 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 TWISTNBQ3B726 338 aaPredicted RBP7.11□□□□□ -1.27
CLIP4-202ENST00000401605 ANKRD13BQ86YJ7 626 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 TNS4Q8IZW8 715 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 TTC30BQ8N4P2 665 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 TTC13Q8NBP0 860 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 SLAIN1Q8ND83 568 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 RSPH1Q8WYR4 309 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 DPF2Q92785 391 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 EPAS1Q99814 870 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 PANK2Q9BZ23 570 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 GNL3LQ9NVN8 582 aaKnown RBP7.11□□□□□ -1.27
CLIP4-202ENST00000401605 PARP2Q9UGN5 583 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 POLLQ9UGP5 575 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 NRBP1Q9UHY1 535 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 PCDHGA4Q9Y5G9 962 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 PI4KAP2A4QPH2 592 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 H7C1D1 291 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 FAM163BP0C2L3 166 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 FBXO45P0C2W1 286 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 RPS12P25398 132 aaKnown RBP7.11□□□□□ -1.27
CLIP4-202ENST00000401605 ADCY2Q08462 1091 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 CCDC15Q0P6D6 951 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 PDCD2Q16342 344 aaPredicted RBP7.11□□□□□ -1.27
CLIP4-202ENST00000401605 TMEM92Q6UXU6 159 aa7.11□□□□□ -1.27
CLIP4-202ENST00000401605 TAS1R3Q7RTX0 852 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms