RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 CLIC4Q9Y696 253 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 FYB2Q5VWT5 728 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 SPATA1Q5VX52 437 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 HAUS3Q68CZ6 603 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 C11orf57Q6ZUT1 292 aaPredicted RBP19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 CABP7Q86V35 215 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 FBXO18Q8NFZ0 1043 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 HGSO14964 777 aaPredicted RBP19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 SYCE1Q8N0S2 351 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 CPSF2Q9P2I0 782 aaKnown RBP19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 NSFL1CQ9UNZ2 370 aaKnown RBP19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 CALUO43852 315 aaPredicted RBP19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 ERCC5P28715 1186 aaPredicted RBP19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 LPIN2Q92539 896 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 NYXQ9GZU5 481 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 NLRC4Q9NPP4 1024 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 SEC31AO94979 1220 aaKnown RBP19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 GBP1P32455 592 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 GUCY2FP51841 1108 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 INF2Q27J81 1249 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 ERBB4Q15303 1308 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 ADCY9O60503 1353 aa19.04■□□□□ 0.64
PTP4A1-201ENST00000370651 PDIA3P30101 505 aaKnown RBP19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 LIG3P49916 1009 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 DNM2P50570 870 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 NEDD9Q14511 834 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 PLCB1Q9NQ66 1216 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 CIB2O75838 187 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 CLIC6Q96NY7 704 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 SLC52A2Q9HAB3 445 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 PCDH11XQ9BZA7 1347 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 PCDH11YQ9BZA8 1340 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 CEP85LQ5SZL2 805 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 SPATS2Q86XZ4 545 aaKnown RBP19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 PLEKHA4Q9H4M7 779 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 ASIC3Q9UHC3 531 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 SH3TC1Q8TE82 1336 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 PDE8AO60658 829 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 TAF5LO75529 589 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 LONRF2Q1L5Z9 754 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 DPCR1Q3MIW9 517 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 ZNF654Q8IZM8 581 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 KIFAP3Q92845 792 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 ACSBG1Q96GR2 724 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 HAUS7Q99871 368 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 CTTNBP2NLQ9P2B4 639 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 PCDHA5Q9Y5H7 936 aa19.03■□□□□ 0.64
PTP4A1-201ENST00000370651 ZMYM6O95789 1325 aa19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 TCP1P17987 556 aaKnown RBP19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 CTNNA1P35221 906 aaKnown RBP19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 TPTE2Q6XPS3 522 aa19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 PPP1R12CQ9BZL4 782 aa19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 TXNDC16Q9P2K2 825 aa19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 PHLPP2Q6ZVD8 1323 aa19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 TSNAXIP1Q2TAA8 658 aa19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 ATP1A2P50993 1020 aa19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 CCDC97Q96F63 343 aaPredicted RBP19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 EPN1Q9Y6I3 576 aaPredicted RBP19.02■□□□□ 0.64
PTP4A1-201ENST00000370651 IKBKBO14920 756 aa19.02■□□□□ 0.63
PTP4A1-201ENST00000370651 KDRP35968 1356 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 UAP1Q16222 522 aaPredicted RBP19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 SPATA5Q8NB90 893 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 GPCPD1Q9NPB8 672 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 H7C1D1 291 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 CLUL1Q15846 466 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 APBB1IPQ7Z5R6 666 aaPredicted RBP19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 IL17REQ8NFR9 667 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 SPTLC3Q9NUV7 552 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 A1BGP04217 495 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 ARID4AP29374 1257 aaPredicted RBP19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 SF3A3Q12874 501 aaKnown RBP eCLIP19.01■□□□□ 0.638e-13■■■■■ 40.5
PTP4A1-201ENST00000370651 CCDC110Q8TBZ0 833 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 RAB17Q9H0T7 212 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 BTBD18B2RXH4 712 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 DENND2CQ68D51 928 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 TEX11Q8IYF3 940 aa19.01■□□□□ 0.63
PTP4A1-201ENST00000370651 KRT5P13647 590 aa19■□□□□ 0.63
PTP4A1-201ENST00000370651 MSANTD4Q8NCY6 345 aa19■□□□□ 0.63
PTP4A1-201ENST00000370651 ZNF496Q96IT1 587 aaPredicted RBP19■□□□□ 0.63
PTP4A1-201ENST00000370651 FAM204AQ9H8W3 233 aa19■□□□□ 0.63
PTP4A1-201ENST00000370651 SAP30BPQ9UHR5 308 aaKnown RBP19■□□□□ 0.63
PTP4A1-201ENST00000370651 SLC39A14Q15043 492 aa19■□□□□ 0.63
PTP4A1-201ENST00000370651 NELFCDQ8IXH7 590 aa19■□□□□ 0.63
PTP4A1-201ENST00000370651 SIRT2Q8IXJ6 389 aa19■□□□□ 0.63
PTP4A1-201ENST00000370651 TRAF3IP1Q8TDR0 691 aaPredicted RBP19■□□□□ 0.63
PTP4A1-201ENST00000370651 RRP15Q9Y3B9 282 aaKnown RBP19■□□□□ 0.63
PTP4A1-201ENST00000370651 FEZ2Q9UHY8 353 aaPredicted RBP19■□□□□ 0.63
PTP4A1-201ENST00000370651 RCOR1Q9UKL0 485 aa19■□□□□ 0.63
PTP4A1-201ENST00000370651 CCDC105Q8IYK2 499 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 SLC35F6Q8N357 371 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 MCUR1Q96AQ8 359 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 ZBTB21Q9ULJ3 1066 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 KCNA6P17658 529 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 MRRFQ96E11 262 aaKnown RBP18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 TBC1D7Q9P0N9 293 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 CFAP157Q5JU67 520 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 ARHGEF2Q92974 986 aaKnown RBP18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
PTP4A1-201ENST00000370651 RGS16O15492 202 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms