RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 CCDC152Q4G0S7 254 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 RILPL1Q5EBL4 403 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 STAG1Q8WVM7 1258 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 FOXP1Q9H334 677 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-201ENST00000333371 ZSWIM4Q9H7M6 989 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 MRPL44Q9H9J2 332 aaKnown RBP14.07□□□□□ -0.16
VPS33B-201ENST00000333371 BCORQ6W2J9 1755 aa14.07□□□□□ -0.16
VPS33B-201ENST00000333371 ERICH2A1L162 156 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 WASF1Q92558 559 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 ARAP2Q8WZ64 1704 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 CCP110O43303 1012 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 TNKSO95271 1327 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 PLEKHA8P1O95397 391 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 PPARAQ07869 468 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 BMS1Q14692 1282 aaKnown RBP14.06□□□□□ -0.16
VPS33B-201ENST00000333371 SRPRBQ9Y5M8 271 aaKnown RBP14.06□□□□□ -0.16
VPS33B-201ENST00000333371 TIAM2Q8IVF5 1701 aa14.06□□□□□ -0.16
VPS33B-201ENST00000333371 CYP7A1P22680 504 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 CASQ1P31415 396 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 IGHMBP2P38935 993 aaKnown RBP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 SART3Q15020 963 aaKnown RBP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 NT5DC1Q5TFE4 455 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 MLKLQ8NB16 471 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 ENOX1Q8TC92 643 aaKnown RBP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 UBAC1Q9BSL1 405 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 LZTFL1Q9NQ48 299 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 RAI14Q9P0K7 980 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 NACAP1Q9BZK3 213 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 HOOK1Q9UJC3 728 aaKnown RBP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 RREB1Q92766 1687 aa14.05□□□□□ -0.16
VPS33B-201ENST00000333371 POLR3GO15318 223 aaPredicted RBP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 ZRANB2O95218 330 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 TFRCP02786 760 aaKnown RBP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 DHX8Q14562 1220 aaKnown RBP14.05□□□□□ -0.16
VPS33B-201ENST00000333371 MYH13Q9UKX3 1938 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 ADAMTS3O15072 1205 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 SASH3O75995 380 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 GYG1P46976 350 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 DYNLL1P63167 89 aaKnown RBP14.04□□□□□ -0.16
VPS33B-201ENST00000333371 NR1I3Q14994 352 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 ZNF174Q15697 407 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 PKN1Q16512 942 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 TMCO3Q6UWJ1 677 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 APTXQ7Z2E3 356 aaKnown RBP14.04□□□□□ -0.16
VPS33B-201ENST00000333371 SYMPKQ92797 1274 aaKnown RBP14.04□□□□□ -0.16
VPS33B-201ENST00000333371 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-201ENST00000333371 STX10O60499 249 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 NTSR2O95665 410 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 PLCD1P51178 756 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 RBL2Q08999 1139 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 DPYDQ12882 1025 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 SEC23AQ15436 765 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 VPS72Q15906 364 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 RAD9BQ6WBX8 426 aa14.04□□□□□ -0.16
VPS33B-201ENST00000333371 LRP5O75197 1615 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 EFCAB8A8MWE9 144 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 MAP3K9P80192 1104 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 CHRNDQ07001 517 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 FCHSD1Q86WN1 690 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 ENAHQ8N8S7 591 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-201ENST00000333371 NOL10Q9BSC4 688 aaKnown RBP14.03□□□□□ -0.16
VPS33B-201ENST00000333371 ZCCHC17Q9NP64 241 aaKnown RBP14.03□□□□□ -0.16
VPS33B-201ENST00000333371 ABL1P00519 1130 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 TUBB4AP04350 444 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-201ENST00000333371 KCNQ4P56696 695 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 PPP2R3AQ06190 1150 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-201ENST00000333371 PAGE5Q96GU1 130 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 BLZF1Q9H2G9 400 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 MRFAP1Q9Y605 127 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 CICQ96RK0 1608 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-201ENST00000333371 COL5A3P25940 1745 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-201ENST00000333371 NID2Q14112 1375 aa14.03□□□□□ -0.16
VPS33B-201ENST00000333371 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.16
VPS33B-201ENST00000333371 A0A1B0GTH6 734 aa14.02□□□□□ -0.16
VPS33B-201ENST00000333371 TRIM75PA6NK02 468 aa14.02□□□□□ -0.16
VPS33B-201ENST00000333371 NMT2O60551 498 aa14.02□□□□□ -0.16
VPS33B-201ENST00000333371 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.16
VPS33B-201ENST00000333371 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.16
VPS33B-201ENST00000333371 SPATA20Q8TB22 786 aa14.02□□□□□ -0.16
VPS33B-201ENST00000333371 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.17
VPS33B-201ENST00000333371 CDC25AP30304 524 aa14.02□□□□□ -0.17
VPS33B-201ENST00000333371 CREBRFQ8IUR6 639 aa14.02□□□□□ -0.17
VPS33B-201ENST00000333371 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.17
VPS33B-201ENST00000333371 SYNRGQ9UMZ2 1314 aa14.02□□□□□ -0.17
VPS33B-201ENST00000333371 CCDC196A0A1B0GTZ2 297 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 MYO1BO43795 1136 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 CCT6AP40227 531 aaKnown RBP14.01□□□□□ -0.17
VPS33B-201ENST00000333371 AKAP17AQ02040 695 aaKnown RBP14.01□□□□□ -0.17
VPS33B-201ENST00000333371 CLEC4GQ6UXB4 293 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 BICDL1Q6ZP65 573 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 IGSF22Q8N9C0 903 aa14.01□□□□□ -0.17
VPS33B-201ENST00000333371 DACH1Q9UI36 760 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms