RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 SMCO2A6NFE2 343 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 FAM47AQ5JRC9 791 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 GPHNQ9NQX3 736 aaPredicted RBP18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 KIAA1468Q9P260 1216 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 TSKSQ9UJT2 592 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 ECM2O94769 699 aaPredicted RBP18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 RNASE9P60153 205 aaKnown RBP18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 USH1GQ495M9 461 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 NOSTRINQ8IVI9 506 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 NELFCDQ8IXH7 590 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 E7EVH7 732 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 CEP104O60308 925 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 GCNT3O95395 438 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 MRPL44Q9H9J2 332 aaKnown RBP18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 TMEM63CQ9P1W3 806 aa18.42■□□□□ 0.54
NSMCE3-201ENST00000332303 PCCAP05165 728 aaPredicted RBP18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 PSMC4P43686 418 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 MCTP2Q6DN12 878 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 MAEAQ7L5Y9 396 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 IFNL3Q8IZI9 196 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 CCDC110Q8TBZ0 833 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 TEKT1Q969V4 418 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 RIOK3O14730 519 aaKnown RBP18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 MTX1Q13505 466 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 RUFY4Q6ZNE9 571 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 IWS1Q96ST2 819 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 SERTAD1Q9UHV2 236 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 KCNQ3O43525 872 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 DTNBO60941 627 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 DCUN1D2Q6PH85 259 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 ZBTB9Q96C00 473 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 CCDC51Q96ER9 411 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 HAUS7Q99871 368 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
NSMCE3-201ENST00000332303 DDX39AO00148 427 aaKnown RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 VIMP08670 466 aaKnown RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 TRMT44Q8IYL2 757 aaKnown RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 SLF1Q9BQI6 1058 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 GTF2IP78347 998 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 RAD51AP2Q09MP3 1159 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 CEP57Q86XR8 500 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 SYCE1Q8N0S2 351 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 SEC62Q99442 399 aaKnown RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 ZSWIM6Q9HCJ5 1215 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 TBC1D7Q9P0N9 293 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 PFKFB2O60825 505 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 SFMBT2Q5VUG0 894 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 INTS8Q75QN2 995 aaKnown RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 GPATCH11Q8N954 259 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 USP28Q96RU2 1077 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 HPDP32754 393 aaPredicted RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 PTH1RQ03431 593 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 RPS6KA1Q15418 735 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 UAP1Q16222 522 aaPredicted RBP18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 AFAP1L1Q8TED9 768 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 USP40Q9NVE5 1235 aa18.4■□□□□ 0.54
NSMCE3-201ENST00000332303 CD19P15391 556 aa18.39■□□□□ 0.54
NSMCE3-201ENST00000332303 DNM2P50570 870 aa18.39■□□□□ 0.54
NSMCE3-201ENST00000332303 TTLL7Q6ZT98 887 aa18.39■□□□□ 0.54
NSMCE3-201ENST00000332303 XPO4Q9C0E2 1151 aaKnown RBP18.39■□□□□ 0.54
NSMCE3-201ENST00000332303 COPRSQ9NQ92 184 aa18.39■□□□□ 0.54
NSMCE3-201ENST00000332303 ASIC3Q9UHC3 531 aa18.39■□□□□ 0.54
NSMCE3-201ENST00000332303 KDM3AQ9Y4C1 1321 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 GNA14O95837 355 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 PFKFB1P16118 471 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 NDUFAB1O14561 156 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 ADD1P35611 737 aaKnown RBP18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 CFAP221Q4G0U5 840 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 BLIDQ8IZY5 108 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 B4GALNT4Q76KP1 1039 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 OR8K1Q8NGG5 319 aa18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 ZSCAN10Q96SZ4 725 aaPredicted RBP18.39■□□□□ 0.53
NSMCE3-201ENST00000332303 PAK2Q13177 524 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 NIM1KQ8IY84 436 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 BLZF1Q9H2G9 400 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 FAM207AQ9NSI2 230 aaPredicted RBP18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 GAS7O60861 476 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 PEX26Q7Z412 305 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 DAAM2Q86T65 1068 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 NLRX1Q86UT6 975 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 PNMA1Q8ND90 353 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 SMC1BQ8NDV3 1235 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 MTMR6Q9Y217 621 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 TNKSO95271 1327 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 GABPB2Q8TAK5 448 aaPredicted RBP18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 RNF34Q969K3 372 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 TRIM31Q9BZY9 425 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 FGAP02671 866 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 ERCC3P19447 782 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 RASA3Q14644 834 aa18.38■□□□□ 0.53
NSMCE3-201ENST00000332303 CMA1P23946 247 aa18.37■□□□□ 0.53
NSMCE3-201ENST00000332303 LACTBP83111 547 aaPredicted RBP18.37■□□□□ 0.53
NSMCE3-201ENST00000332303 IFIH1Q9BYX4 1025 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms