RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
USP44-201ENST00000258499 PSMB7Q99436 277 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 BPIFA3Q9BQP9 254 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 FBXO3Q9UK99 471 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 RIPOR2Q9Y4F9 1068 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 PHLPP2Q6ZVD8 1323 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 MEGF6O75095 1541 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 MACROD2A1Z1Q3 448 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 VGLL3A8MV65 326 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 ENC1O14682 589 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 PTPREP23469 700 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 SPA17Q15506 151 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 CCDC122Q5T0U0 273 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 WWC2Q6AWC2 1192 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 FOXP4Q8IVH2 680 aaPredicted RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 C10orf67Q8IYJ2 551 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 ZNF444Q8N0Y2 327 aaPredicted RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 SLC35F6Q8N357 371 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 ENOX1Q8TC92 643 aaKnown RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 RASGRP4Q8TDF6 673 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 IGDCC4Q8TDY8 1250 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 BBXQ8WY36 941 aaPredicted RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 GBP3Q9H0R5 595 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 LUC7L2Q9Y383 392 aaKnown RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 MROH5Q6ZUA9 1318 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 SALL1Q9NSC2 1324 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 RTL9Q8NET4 1388 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 PLEKHA8P1O95397 391 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 BMP15O95972 392 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 KIF5BP33176 963 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 LIFRP42702 1097 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 ASIC1P78348 528 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 SPAG1Q07617 926 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 PAK1Q13153 545 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 SPATA1Q5VX52 437 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 TXLNBQ8N3L3 684 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 NELFBQ8WX92 580 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 GPKOWQ92917 476 aaPredicted RBP eCLIP5.36□□□□□ -1.55
USP44-201ENST00000258499 NAPGQ99747 312 aaPredicted RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 CRNKL1Q9BZJ0 848 aaKnown RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 FOXP1Q9H334 677 aaPredicted RBP5.36□□□□□ -1.55
USP44-201ENST00000258499 RABEP2Q9H5N1 569 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 TCP11L1Q9NUJ3 509 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 ANKIB1Q9P2G1 1089 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 ZNF652Q9Y2D9 606 aa5.36□□□□□ -1.55
USP44-201ENST00000258499 PSMA7O14818 248 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 EPS15P42566 896 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 KCNQ4P56696 695 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 CHRNDQ07001 517 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 CCDC96Q2M329 555 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 TDRD12Q587J7 1177 aaKnown RBP5.35□□□□□ -1.55
USP44-201ENST00000258499 UIMC1Q96RL1 719 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 CENPHQ9H3R5 247 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 PDE11AQ9HCR9 933 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 EPB41L4AQ9HCS5 686 aaPredicted RBP5.35□□□□□ -1.55
USP44-201ENST00000258499 RSPH14Q9UHP6 348 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 TUBE1Q9UJT0 475 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 SOS2Q07890 1332 aaPredicted RBP5.35□□□□□ -1.55
USP44-201ENST00000258499 GSG1L2A8MUP6 293 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 AKR1B10O60218 316 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 TADA3O75528 432 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 ZMYND10O75800 440 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 SLFN14P0C7P3 912 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 PPARDQ03181 441 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 PTPAQ15257 358 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 LONRF2Q1L5Z9 754 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 DNAJC21Q5F1R6 531 aaKnown RBP5.35□□□□□ -1.55
USP44-201ENST00000258499 DTHD1Q6ZMT9 781 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 SMARCC1Q92922 1105 aaPredicted RBP5.35□□□□□ -1.55
USP44-201ENST00000258499 ZSCAN10Q96SZ4 725 aaPredicted RBP5.35□□□□□ -1.55
USP44-201ENST00000258499 RMND1Q9NWS8 449 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 SRPRBQ9Y5M8 271 aaKnown RBP5.35□□□□□ -1.55
USP44-201ENST00000258499 G3V3G9 751 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 POTEB2H3BUK9 544 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 PIP4K2BP78356 416 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 TBC1D8BQ0IIM8 1120 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 MORC3Q14149 939 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 LETM2Q2VYF4 491 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 DCAF8Q5TAQ9 597 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 SUSD4Q5VX71 490 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 CTR9Q6PD62 1173 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 HDXQ7Z353 690 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 CACNA2D4Q7Z3S7 1137 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 LRP10Q7Z4F1 713 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 AKT1S1Q96B36 256 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 PAGE5Q96GU1 130 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 CARD10Q9BWT7 1032 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 MMRN2Q9H8L6 949 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 EXOC1Q9NV70 894 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 SLAIN2Q9P270 581 aa5.35□□□□□ -1.55
USP44-201ENST00000258499 KCNJ18B7U540 433 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 NMT2O60551 498 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 KRT18P05783 430 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 TSPY3P0CV98 308 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 TSPY8P0CW00 308 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 HNRNPH2P55795 449 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 KCNJ12Q14500 433 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 ZSCAN26Q16670 478 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CYP26C1Q6V0L0 522 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms