RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 4933428G20RikQ9D3X4 101 aa4.67□□□□□ -1.66
Ssr1-203ENSMUST00000225246 Sprr2dO70555 85 aa4.66□□□□□ -1.66
Ssr1-203ENSMUST00000225246 Fsip2A2ARZ3 6995 aa4.63□□□□□ -1.67
Ssr1-203ENSMUST00000225246 Gm11938Q9D3H4 131 aa4.61□□□□□ -1.67
Ssr1-203ENSMUST00000225246 Mt4P47945 62 aa4.59□□□□□ -1.67
Ssr1-203ENSMUST00000225246 Lce1eQ9D139 143 aa4.59□□□□□ -1.67
Ssr1-203ENSMUST00000225246 Lce1bQ9D149 137 aa4.59□□□□□ -1.67
Ssr1-203ENSMUST00000225246 A030014E15RikA0A1Y7VJV2 120 aa4.56□□□□□ -1.68
Ssr1-203ENSMUST00000225246 Krtap6-3A0A087WQL6 57 aa4.54□□□□□ -1.68
Ssr1-203ENSMUST00000225246 Krtap4-13Q9D7P3 165 aa4.54□□□□□ -1.68
Ssr1-203ENSMUST00000225246 Gm38119A0A0A6YX29 146 aa4.52□□□□□ -1.69
Ssr1-203ENSMUST00000225246 Krtap22-2J3QNX6 67 aa4.46□□□□□ -1.7
Ssr1-203ENSMUST00000225246 Gm10272F7CZ33 110 aa4.43□□□□□ -1.7
Ssr1-203ENSMUST00000225246 Sprr2kO70562 68 aa4.39□□□□□ -1.71
Ssr1-203ENSMUST00000225246 Lce1lQ9D1G7 135 aa4.38□□□□□ -1.71
Ssr1-203ENSMUST00000225246 Krtap19-4Q925H7 84 aa4.31□□□□□ -1.72
Ssr1-203ENSMUST00000225246 Lce1cQ9D1C5 147 aa4.31□□□□□ -1.72
Ssr1-203ENSMUST00000225246 2300003K06RikA2A4M0 262 aa4.3□□□□□ -1.72
Ssr1-203ENSMUST00000225246 A030003K21RikA0A1Y7VIM3 128 aa4.21□□□□□ -1.74
Ssr1-203ENSMUST00000225246 Gm10100J3QK64 120 aa4.19□□□□□ -1.74
Ssr1-203ENSMUST00000225246 Lce1a1Q9CQH5 143 aa4.19□□□□□ -1.74
Ssr1-203ENSMUST00000225246 Sprr2iO70560 76 aa4.18□□□□□ -1.74
Ssr1-203ENSMUST00000225246 Lce3bQ9CQM7 98 aa4.17□□□□□ -1.74
Ssr1-203ENSMUST00000225246 Lce1fB9EJP6 147 aa4.16□□□□□ -1.74
Ssr1-203ENSMUST00000225246 Gm11559Q9D3H7 191 aa4.14□□□□□ -1.75
Ssr1-203ENSMUST00000225246 Krtap20-2E9Q0A8 60 aa4.14□□□□□ -1.75
Ssr1-203ENSMUST00000225246 Gm10142J3KMP7 120 aa4.13□□□□□ -1.75
Ssr1-203ENSMUST00000225246 Sprr2hO70559 108 aa4.06□□□□□ -1.76
Ssr1-203ENSMUST00000225246 Sprr2eO70556 76 aa4.03□□□□□ -1.76
Ssr1-203ENSMUST00000225246 Gm6217A0A1Y7VJK9 128 aa4□□□□□ -1.77
Ssr1-203ENSMUST00000225246 Lce3cQ91V05 98 aa4□□□□□ -1.77
Ssr1-203ENSMUST00000225246 Eppk1Q8R0W0 6548 aa3.99□□□□□ -1.77
Ssr1-203ENSMUST00000225246 Lce3dE9Q8V1 98 aa3.98□□□□□ -1.77
Ssr1-203ENSMUST00000225246 Sprr2fO70557 76 aa3.95□□□□□ -1.78
Ssr1-203ENSMUST00000225246 Syne1Q6ZWR6 8799 aa3.93□□□□□ -1.78
Ssr1-203ENSMUST00000225246 Lce3eF8VQJ0 98 aa3.91□□□□□ -1.78
Ssr1-203ENSMUST00000225246 Lce3fQ6PAI4 98 aa3.91□□□□□ -1.78
Ssr1-203ENSMUST00000225246 Lce3aQ497I5 98 aa3.84□□□□□ -1.79
Ssr1-203ENSMUST00000225246 ObscnA2AAJ9 8891 aaKnown RBP3.78□□□□□ -1.8
Ssr1-203ENSMUST00000225246 Gm11639A0A1D5RLM8 5808 aa3.77□□□□□ -1.81
Ssr1-203ENSMUST00000225246 Gm11554B1AQB2 190 aa3.74□□□□□ -1.81
Ssr1-203ENSMUST00000225246 Krtap5-2Q9D5Z7 189 aa3.74□□□□□ -1.81
Ssr1-203ENSMUST00000225246 Macf1Q9QXZ0 7354 aaKnown RBP3.71□□□□□ -1.82
Ssr1-203ENSMUST00000225246 Lce1kJ3QP15 125 aa3.67□□□□□ -1.82
Ssr1-203ENSMUST00000225246 Mt1P02802 61 aaKnown RBP3.64□□□□□ -1.83
Ssr1-203ENSMUST00000225246 Kmt2dQ6PDK2 5588 aa3.63□□□□□ -1.83
Ssr1-203ENSMUST00000225246 A0A286YCP9 139 aa3.63□□□□□ -1.83
Ssr1-203ENSMUST00000225246 Gpr98Q8VHN7 6298 aaKnown RBP3.61□□□□□ -1.83
Ssr1-203ENSMUST00000225246 Gm4553A0A1B0GSA9 284 aa3.6□□□□□ -1.83
Ssr1-203ENSMUST00000225246 Gm11568A2A4M2 211 aa3.56□□□□□ -1.84
Ssr1-203ENSMUST00000225246 Krtap9-1Q64526 186 aa3.56□□□□□ -1.84
Ssr1-203ENSMUST00000225246 Muc19Q6PZE0 7524 aa3.55□□□□□ -1.84
Ssr1-203ENSMUST00000225246 Gm2431E9Q8S1 172 aa3.53□□□□□ -1.84
Ssr1-203ENSMUST00000225246 Krtap4-16Q91W93 202 aa3.53□□□□□ -1.84
Ssr1-203ENSMUST00000225246 Gm45337A0A1B0GS71 263 aa3.42□□□□□ -1.86
Ssr1-203ENSMUST00000225246 DstQ91ZU6 7393 aaKnown RBP3.33□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Gm10024A0A0A0MQA4 119 aa3.33□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Hmcn1D3YXG0 5634 aa3.31□□□□□ -1.88
Ssr1-203ENSMUST00000225246 NebE9Q1W3 7152 aa3.29□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Gm39115A0A1B0GSH7 232 aa3.29□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Gm40460A0A1B0GR10 244 aa3.28□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Gm7579A0A1B0GRJ4 243 aa3.28□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Krtap5-5Q2TA51 241 aa3.28□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Krtap5-4Q62220 223 aa3.28□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Gm10153A0A1B0GRL1 320 aa3.28□□□□□ -1.88
Ssr1-203ENSMUST00000225246 Mt3P28184 68 aa3.19□□□□□ -1.9
Ssr1-203ENSMUST00000225246 Gm45618A0A1B0GSA0 219 aa3.13□□□□□ -1.91
Ssr1-203ENSMUST00000225246 AhnakE9Q616 5656 aaKnown RBP3.05□□□□□ -1.92
Ssr1-203ENSMUST00000225246 Gm29735A0A1B0GT06 219 aa2.87□□□□□ -1.95
Ssr1-203ENSMUST00000225246 Gm11567Q9D141 195 aa2.86□□□□□ -1.95
Ssr1-203ENSMUST00000225246 1110025L11RikO09048 78 aa2.85□□□□□ -1.95
Ssr1-203ENSMUST00000225246 Krtap6-5Q925H3 78 aa2.85□□□□□ -1.95
Ssr1-203ENSMUST00000225246 Sprr2bO70554 98 aa2.77□□□□□ -1.97
Ssr1-203ENSMUST00000225246 Muc16A0A140LJ72 8478 aa2.76□□□□□ -1.97
Ssr1-203ENSMUST00000225246 Gm10229O08631 77 aa2.49□□□□□ -2.01
Ssr1-203ENSMUST00000225246 Phgr1Q8K0G7 91 aa2.37□□□□□ -2.03
Ssr1-203ENSMUST00000225246 Krtap21-1Q925H4 128 aa2.36□□□□□ -2.03
Ssr1-203ENSMUST00000225246 Krtap6-2O08884 159 aa2.07□□□□□ -2.08
Ssr1-203ENSMUST00000225246 Krtap5-1Q64507 230 aa2.05□□□□□ -2.08
Ssr1-203ENSMUST00000225246 Gm4559A4IF42 199 aa2.01□□□□□ -2.09
Retrieved 80 of 22,080 RNA–protein pairs in 10.7 ms