RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 2300003K06RikA2A4M0 262 aa5.31□□□□□ -1.56
Upf1-202ENSMUST00000215817 Lce1bQ9D149 137 aa5.29□□□□□ -1.56
Upf1-202ENSMUST00000215817 Krtap4-7Q9D732 168 aa5.23□□□□□ -1.57
Upf1-202ENSMUST00000215817 Lce1fB9EJP6 147 aa5.22□□□□□ -1.57
Upf1-202ENSMUST00000215817 Lce1cQ9D1C5 147 aa5.22□□□□□ -1.57
Upf1-202ENSMUST00000215817 Lce1dQ9D731 133 aa5.22□□□□□ -1.57
Upf1-202ENSMUST00000215817 Krtap31-2Q8CAY5 177 aa5.21□□□□□ -1.58
Upf1-202ENSMUST00000215817 Lce3eF8VQJ0 98 aa5.18□□□□□ -1.58
Upf1-202ENSMUST00000215817 Lce3fQ6PAI4 98 aa5.18□□□□□ -1.58
Upf1-202ENSMUST00000215817 Gm10142J3KMP7 120 aa5.15□□□□□ -1.59
Upf1-202ENSMUST00000215817 Lce3dE9Q8V1 98 aa5.12□□□□□ -1.59
Upf1-202ENSMUST00000215817 Lce1hQ9D6R3 140 aa5.12□□□□□ -1.59
Upf1-202ENSMUST00000215817 Macf1Q9QXZ0 7354 aaKnown RBP5.11□□□□□ -1.59
Upf1-202ENSMUST00000215817 Krtap31-1Q9D644 177 aa5.11□□□□□ -1.59
Upf1-202ENSMUST00000215817 Gm11555B1AQ89 175 aa5.07□□□□□ -1.6
Upf1-202ENSMUST00000215817 Lce1eQ9D139 143 aa4.98□□□□□ -1.61
Upf1-202ENSMUST00000215817 Lce3aQ497I5 98 aa4.98□□□□□ -1.61
Upf1-202ENSMUST00000215817 Lce1kJ3QP15 125 aa4.94□□□□□ -1.62
Upf1-202ENSMUST00000215817 Krtap6-3A0A087WQL6 57 aa4.91□□□□□ -1.62
Upf1-202ENSMUST00000215817 Krtap19-4Q925H7 84 aa4.88□□□□□ -1.63
Upf1-202ENSMUST00000215817 Lce1a1Q9CQH5 143 aa4.87□□□□□ -1.63
Upf1-202ENSMUST00000215817 Muc16A0A140LJ72 8478 aa4.84□□□□□ -1.64
Upf1-202ENSMUST00000215817 Sprr2fO70557 76 aa4.71□□□□□ -1.65
Upf1-202ENSMUST00000215817 Krtap20-2E9Q0A8 60 aa4.68□□□□□ -1.66
Upf1-202ENSMUST00000215817 Sprr2eO70556 76 aa4.67□□□□□ -1.66
Upf1-202ENSMUST00000215817 Gm11554B1AQB2 190 aa4.65□□□□□ -1.67
Upf1-202ENSMUST00000215817 Gm11938Q9D3H4 131 aa4.57□□□□□ -1.68
Upf1-202ENSMUST00000215817 Gm10024A0A0A0MQA4 119 aa4.51□□□□□ -1.69
Upf1-202ENSMUST00000215817 NebE9Q1W3 7152 aa4.45□□□□□ -1.7
Upf1-202ENSMUST00000215817 DstQ91ZU6 7393 aaKnown RBP4.44□□□□□ -1.7
Upf1-202ENSMUST00000215817 ObscnA2AAJ9 8891 aaKnown RBP4.42□□□□□ -1.7
Upf1-202ENSMUST00000215817 Sprr2dO70555 85 aa4.41□□□□□ -1.7
Upf1-202ENSMUST00000215817 Mt3P28184 68 aa4.34□□□□□ -1.72
Upf1-202ENSMUST00000215817 Mt1P02802 61 aaKnown RBP4.32□□□□□ -1.72
Upf1-202ENSMUST00000215817 Krtap4-16Q91W93 202 aa4.32□□□□□ -1.72
Upf1-202ENSMUST00000215817 Sprr2hO70559 108 aa4.3□□□□□ -1.72
Upf1-202ENSMUST00000215817 Muc19Q6PZE0 7524 aa4.3□□□□□ -1.72
Upf1-202ENSMUST00000215817 Eppk1Q8R0W0 6548 aa4.19□□□□□ -1.74
Upf1-202ENSMUST00000215817 Kmt2dQ6PDK2 5588 aa4.07□□□□□ -1.76
Upf1-202ENSMUST00000215817 Gm11568A2A4M2 211 aa4.02□□□□□ -1.77
Upf1-202ENSMUST00000215817 Krtap9-1Q64526 186 aa4.02□□□□□ -1.77
Upf1-202ENSMUST00000215817 Gm11639A0A1D5RLM8 5808 aa4□□□□□ -1.77
Upf1-202ENSMUST00000215817 Gm11559Q9D3H7 191 aa3.99□□□□□ -1.77
Upf1-202ENSMUST00000215817 Gpr98Q8VHN7 6298 aaKnown RBP3.91□□□□□ -1.78
Upf1-202ENSMUST00000215817 Hmcn1D3YXG0 5634 aa3.83□□□□□ -1.8
Upf1-202ENSMUST00000215817 Krtap5-2Q9D5Z7 189 aa3.81□□□□□ -1.8
Upf1-202ENSMUST00000215817 Gm4553A0A1B0GSA9 284 aa3.6□□□□□ -1.83
Upf1-202ENSMUST00000215817 A0A1Y7VJH8 109 aa3.5□□□□□ -1.85
Upf1-202ENSMUST00000215817 Gm2431E9Q8S1 172 aa3.49□□□□□ -1.85
Upf1-202ENSMUST00000215817 Sprr2bO70554 98 aa3.47□□□□□ -1.85
Upf1-202ENSMUST00000215817 A030005L19RikA0A1Y7VIU2 113 aa3.42□□□□□ -1.86
Upf1-202ENSMUST00000215817 Gm10153A0A1B0GRL1 320 aa3.36□□□□□ -1.87
Upf1-202ENSMUST00000215817 1110025L11RikO09048 78 aa3.36□□□□□ -1.87
Upf1-202ENSMUST00000215817 Krtap6-5Q925H3 78 aa3.36□□□□□ -1.87
Upf1-202ENSMUST00000215817 AhnakE9Q616 5656 aaKnown RBP3.29□□□□□ -1.88
Upf1-202ENSMUST00000215817 Gm45337A0A1B0GS71 263 aa3.28□□□□□ -1.88
Upf1-202ENSMUST00000215817 Gm40460A0A1B0GR10 244 aa3.16□□□□□ -1.9
Upf1-202ENSMUST00000215817 Gm7579A0A1B0GRJ4 243 aa3.16□□□□□ -1.9
Upf1-202ENSMUST00000215817 Krtap5-5Q2TA51 241 aa3.16□□□□□ -1.9
Upf1-202ENSMUST00000215817 Krtap5-4Q62220 223 aa3.16□□□□□ -1.9
Upf1-202ENSMUST00000215817 Gm10229O08631 77 aa3.1□□□□□ -1.91
Upf1-202ENSMUST00000215817 Gm39115A0A1B0GSH7 232 aa3.04□□□□□ -1.92
Upf1-202ENSMUST00000215817 Phgr1Q8K0G7 91 aa2.8□□□□□ -1.96
Upf1-202ENSMUST00000215817 A0A1Y7VLE6 161 aa2.73□□□□□ -1.97
Upf1-202ENSMUST00000215817 Gm45618A0A1B0GSA0 219 aa2.69□□□□□ -1.98
Upf1-202ENSMUST00000215817 Krtap6-2O08884 159 aa2.63□□□□□ -1.99
Upf1-202ENSMUST00000215817 Gm11567Q9D141 195 aa2.59□□□□□ -2
Upf1-202ENSMUST00000215817 Krtap21-1Q925H4 128 aa2.52□□□□□ -2.01
Upf1-202ENSMUST00000215817 Gm29735A0A1B0GT06 219 aa2.33□□□□□ -2.04
Upf1-202ENSMUST00000215817 A0A1Y7VJ07 166 aa2.14□□□□□ -2.07
Upf1-202ENSMUST00000215817 Krtap5-1Q64507 230 aa1.9□□□□□ -2.11
Upf1-202ENSMUST00000215817 A0A286YCP9 139 aa1.74□□□□□ -2.13
Upf1-202ENSMUST00000215817 A030003K21RikA0A1Y7VIM3 128 aa1.67□□□□□ -2.14
Upf1-202ENSMUST00000215817 Krtap28-13A0A087WQP5 138 aa1.65□□□□□ -2.15
Upf1-202ENSMUST00000215817 Gm7544A0A1Y7VJ58 118 aa1.55□□□□□ -2.16
Upf1-202ENSMUST00000215817 Gm6217A0A1Y7VJK9 128 aa1.54□□□□□ -2.16
Upf1-202ENSMUST00000215817 Krtap28-10A0A1Y7VP58 119 aa1.44□□□□□ -2.18
Upf1-202ENSMUST00000215817 A030005K14RikA0A1Y7VNY1 122 aa1.38□□□□□ -2.19
Upf1-202ENSMUST00000215817 A030014E15RikA0A1Y7VJV2 120 aa1.38□□□□□ -2.19
Upf1-202ENSMUST00000215817 Gm4559A4IF42 199 aa1.29□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 134.9 ms