RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Muc5bE9Q5I3 4800 aa3.09□□□□□ -1.91
Ldlr-202ENSMUST00000213114 Krtap4-1Q3UUY3 169 aa3.07□□□□□ -1.92
Ldlr-202ENSMUST00000213114 Gm11596B1AQB0 205 aa3.02□□□□□ -1.93
Ldlr-202ENSMUST00000213114 A0A1Y7VJH8 109 aa3.02□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Lce1eQ9D139 143 aa3.01□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Krtap4-9B1AQA9 244 aa3□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Krtap19-4Q925H7 84 aa3□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Gm11564A2A4L9 201 aa2.99□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Gm11563B1AQ90 168 aa2.99□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Gm11595B1AQA7 289 aa2.99□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Krtap4-8B1AQA8 209 aa2.99□□□□□ -1.93
Ldlr-202ENSMUST00000213114 Syne2Q6ZWQ0 6874 aaKnown RBP2.96□□□□□ -1.94
Ldlr-202ENSMUST00000213114 Gm11938Q9D3H4 131 aa2.93□□□□□ -1.94
Ldlr-202ENSMUST00000213114 2300003K06RikA2A4M0 262 aa2.93□□□□□ -1.94
Ldlr-202ENSMUST00000213114 Gm11562A0PK51 136 aa2.92□□□□□ -1.94
Ldlr-202ENSMUST00000213114 Sprr2dO70555 85 aa2.92□□□□□ -1.94
Ldlr-202ENSMUST00000213114 Macf1Q9QXZ0 7354 aaKnown RBP2.92□□□□□ -1.94
Ldlr-202ENSMUST00000213114 Krtap4-13Q9D7P3 165 aa2.92□□□□□ -1.94
Ldlr-202ENSMUST00000213114 Krtap28-10A0A1Y7VP58 119 aa2.89□□□□□ -1.95
Ldlr-202ENSMUST00000213114 Krtap4-7Q9D732 168 aa2.88□□□□□ -1.95
Ldlr-202ENSMUST00000213114 Krtap31-2Q8CAY5 177 aa2.88□□□□□ -1.95
Ldlr-202ENSMUST00000213114 Sprr2eO70556 76 aa2.87□□□□□ -1.95
Ldlr-202ENSMUST00000213114 Krtap31-1Q9D644 177 aa2.87□□□□□ -1.95
Ldlr-202ENSMUST00000213114 Gm10024A0A0A0MQA4 119 aa2.85□□□□□ -1.95
Ldlr-202ENSMUST00000213114 A0A1Y7VLE6 161 aa2.83□□□□□ -1.96
Ldlr-202ENSMUST00000213114 Gm11555B1AQ89 175 aa2.81□□□□□ -1.96
Ldlr-202ENSMUST00000213114 Lce1kJ3QP15 125 aa2.81□□□□□ -1.96
Ldlr-202ENSMUST00000213114 Krtap28-13A0A087WQP5 138 aa2.8□□□□□ -1.96
Ldlr-202ENSMUST00000213114 Sprr2fO70557 76 aa2.79□□□□□ -1.96
Ldlr-202ENSMUST00000213114 ObscnA2AAJ9 8891 aaKnown RBP2.74□□□□□ -1.97
Ldlr-202ENSMUST00000213114 A030005K14RikA0A1Y7VNY1 122 aa2.74□□□□□ -1.97
Ldlr-202ENSMUST00000213114 Sprr2hO70559 108 aa2.73□□□□□ -1.97
Ldlr-202ENSMUST00000213114 Lce1a1Q9CQH5 143 aa2.69□□□□□ -1.98
Ldlr-202ENSMUST00000213114 Krtap6-3A0A087WQL6 57 aa2.67□□□□□ -1.98
Ldlr-202ENSMUST00000213114 A030005L19RikA0A1Y7VIU2 113 aa2.66□□□□□ -1.98
Ldlr-202ENSMUST00000213114 Krtap4-16Q91W93 202 aa2.64□□□□□ -1.99
Ldlr-202ENSMUST00000213114 DstQ91ZU6 7393 aaKnown RBP2.58□□□□□ -2
Ldlr-202ENSMUST00000213114 Krtap20-2E9Q0A8 60 aa2.57□□□□□ -2
Ldlr-202ENSMUST00000213114 Gm11554B1AQB2 190 aa2.56□□□□□ -2
Ldlr-202ENSMUST00000213114 Muc19Q6PZE0 7524 aa2.56□□□□□ -2
Ldlr-202ENSMUST00000213114 Mt3P28184 68 aa2.55□□□□□ -2
Ldlr-202ENSMUST00000213114 Gm7544A0A1Y7VJ58 118 aa2.55□□□□□ -2
Ldlr-202ENSMUST00000213114 A0A1Y7VJ07 166 aa2.52□□□□□ -2.01
Ldlr-202ENSMUST00000213114 NebE9Q1W3 7152 aa2.52□□□□□ -2.01
Ldlr-202ENSMUST00000213114 Mt1P02802 61 aaKnown RBP2.51□□□□□ -2.01
Ldlr-202ENSMUST00000213114 A030003K21RikA0A1Y7VIM3 128 aa2.41□□□□□ -2.02
Ldlr-202ENSMUST00000213114 A030014E15RikA0A1Y7VJV2 120 aa2.38□□□□□ -2.03
Ldlr-202ENSMUST00000213114 Kmt2dQ6PDK2 5588 aa2.36□□□□□ -2.03
Ldlr-202ENSMUST00000213114 Gm6217A0A1Y7VJK9 128 aa2.28□□□□□ -2.04
Ldlr-202ENSMUST00000213114 Krtap5-2Q9D5Z7 189 aa2.28□□□□□ -2.05
Ldlr-202ENSMUST00000213114 Gm11568A2A4M2 211 aa2.25□□□□□ -2.05
Ldlr-202ENSMUST00000213114 Krtap9-1Q64526 186 aa2.25□□□□□ -2.05
Ldlr-202ENSMUST00000213114 Eppk1Q8R0W0 6548 aa2.24□□□□□ -2.05
Ldlr-202ENSMUST00000213114 Gm11559Q9D3H7 191 aa2.21□□□□□ -2.06
Ldlr-202ENSMUST00000213114 Gm10153A0A1B0GRL1 320 aa2.17□□□□□ -2.06
Ldlr-202ENSMUST00000213114 Gpr98Q8VHN7 6298 aaKnown RBP2.13□□□□□ -2.07
Ldlr-202ENSMUST00000213114 Gm45337A0A1B0GS71 263 aa2.12□□□□□ -2.07
Ldlr-202ENSMUST00000213114 Sprr2bO70554 98 aa2.12□□□□□ -2.07
Ldlr-202ENSMUST00000213114 Gm11639A0A1D5RLM8 5808 aa2.11□□□□□ -2.07
Ldlr-202ENSMUST00000213114 Gm4553A0A1B0GSA9 284 aa2.1□□□□□ -2.07
Ldlr-202ENSMUST00000213114 Hmcn1D3YXG0 5634 aa2.1□□□□□ -2.07
Ldlr-202ENSMUST00000213114 Gm40460A0A1B0GR10 244 aa2.06□□□□□ -2.08
Ldlr-202ENSMUST00000213114 Gm7579A0A1B0GRJ4 243 aa2.06□□□□□ -2.08
Ldlr-202ENSMUST00000213114 Krtap5-5Q2TA51 241 aa2.06□□□□□ -2.08
Ldlr-202ENSMUST00000213114 Krtap5-4Q62220 223 aa2.06□□□□□ -2.08
Ldlr-202ENSMUST00000213114 Gm2431E9Q8S1 172 aa2.04□□□□□ -2.08
Ldlr-202ENSMUST00000213114 1110025L11RikO09048 78 aa2.02□□□□□ -2.09
Ldlr-202ENSMUST00000213114 Krtap6-5Q925H3 78 aa2.02□□□□□ -2.09
Ldlr-202ENSMUST00000213114 A0A286YCP9 139 aa2□□□□□ -2.09
Ldlr-202ENSMUST00000213114 Gm39115A0A1B0GSH7 232 aa1.93□□□□□ -2.1
Ldlr-202ENSMUST00000213114 Gm10229O08631 77 aa1.86□□□□□ -2.11
Ldlr-202ENSMUST00000213114 AhnakE9Q616 5656 aaKnown RBP1.75□□□□□ -2.13
Ldlr-202ENSMUST00000213114 Phgr1Q8K0G7 91 aa1.74□□□□□ -2.13
Ldlr-202ENSMUST00000213114 Gm45618A0A1B0GSA0 219 aa1.71□□□□□ -2.14
Ldlr-202ENSMUST00000213114 Gm29735A0A1B0GT06 219 aa1.55□□□□□ -2.16
Ldlr-202ENSMUST00000213114 Krtap6-2O08884 159 aa1.54□□□□□ -2.16
Ldlr-202ENSMUST00000213114 Krtap21-1Q925H4 128 aa1.53□□□□□ -2.16
Ldlr-202ENSMUST00000213114 Gm11567Q9D141 195 aa1.46□□□□□ -2.18
Ldlr-202ENSMUST00000213114 Krtap5-1Q64507 230 aa1.08□□□□□ -2.24
Ldlr-202ENSMUST00000213114 Gm4559A4IF42 199 aa1.05□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 46 ms