RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 A0A286YCP9 139 aa3.14□□□□□ -1.91
Prpf40a-208ENSMUST00000210789 Sprr2gO70558 76 aa3.12□□□□□ -1.91
Prpf40a-208ENSMUST00000210789 Syne1Q6ZWR6 8799 aa3.12□□□□□ -1.91
Prpf40a-208ENSMUST00000210789 Lce1cQ9D1C5 147 aa3.08□□□□□ -1.92
Prpf40a-208ENSMUST00000210789 Gm10100J3QK64 120 aa3.03□□□□□ -1.92
Prpf40a-208ENSMUST00000210789 Krtap4-6Q3V4B7 195 aa3.03□□□□□ -1.92
Prpf40a-208ENSMUST00000210789 Krtap22-2J3QNX6 67 aa3□□□□□ -1.93
Prpf40a-208ENSMUST00000210789 Syne2Q6ZWQ0 6874 aaKnown RBP2.99□□□□□ -1.93
Prpf40a-208ENSMUST00000210789 Gm10272F7CZ33 110 aa2.99□□□□□ -1.93
Prpf40a-208ENSMUST00000210789 Lce1fB9EJP6 147 aa2.99□□□□□ -1.93
Prpf40a-208ENSMUST00000210789 Gm11562A0PK51 136 aa2.97□□□□□ -1.93
Prpf40a-208ENSMUST00000210789 Sprr2iO70560 76 aa2.97□□□□□ -1.93
Prpf40a-208ENSMUST00000210789 Krtap4-16Q91W93 202 aa2.96□□□□□ -1.94
Prpf40a-208ENSMUST00000210789 Gm11596B1AQB0 205 aa2.96□□□□□ -1.94
Prpf40a-208ENSMUST00000210789 Gm10142J3KMP7 120 aa2.96□□□□□ -1.94
Prpf40a-208ENSMUST00000210789 Sprr2dO70555 85 aa2.95□□□□□ -1.94
Prpf40a-208ENSMUST00000210789 Lce3bQ9CQM7 98 aa2.9□□□□□ -1.94
Prpf40a-208ENSMUST00000210789 Muc16A0A140LJ72 8478 aa2.88□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Gm11564A2A4L9 201 aa2.87□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Gm11595B1AQA7 289 aa2.87□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Krtap4-8B1AQA8 209 aa2.87□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Lce3cQ91V05 98 aa2.87□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Fsip2A2ARZ3 6995 aa2.87□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Lce3dE9Q8V1 98 aa2.86□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Mt4P47945 62 aa2.84□□□□□ -1.95
Prpf40a-208ENSMUST00000210789 Sprr2fO70557 76 aa2.83□□□□□ -1.96
Prpf40a-208ENSMUST00000210789 Sprr2kO70562 68 aa2.82□□□□□ -1.96
Prpf40a-208ENSMUST00000210789 Krtap4-9B1AQA9 244 aa2.82□□□□□ -1.96
Prpf40a-208ENSMUST00000210789 ObscnA2AAJ9 8891 aaKnown RBP2.81□□□□□ -1.96
Prpf40a-208ENSMUST00000210789 Lce3eF8VQJ0 98 aa2.78□□□□□ -1.96
Prpf40a-208ENSMUST00000210789 Lce3fQ6PAI4 98 aa2.78□□□□□ -1.96
Prpf40a-208ENSMUST00000210789 Lce3aQ497I5 98 aa2.76□□□□□ -1.97
Prpf40a-208ENSMUST00000210789 2300003K06RikA2A4M0 262 aa2.73□□□□□ -1.97
Prpf40a-208ENSMUST00000210789 Krtap4-13Q9D7P3 165 aa2.72□□□□□ -1.97
Prpf40a-208ENSMUST00000210789 Sprr2hO70559 108 aa2.71□□□□□ -1.98
Prpf40a-208ENSMUST00000210789 Sprr2eO70556 76 aa2.68□□□□□ -1.98
Prpf40a-208ENSMUST00000210789 Lce1bQ9D149 137 aa2.68□□□□□ -1.98
Prpf40a-208ENSMUST00000210789 Krtap19-4Q925H7 84 aa2.65□□□□□ -1.98
Prpf40a-208ENSMUST00000210789 Gm10024A0A0A0MQA4 119 aa2.63□□□□□ -1.99
Prpf40a-208ENSMUST00000210789 Krtap6-3A0A087WQL6 57 aa2.56□□□□□ -2
Prpf40a-208ENSMUST00000210789 Lce1kJ3QP15 125 aa2.5□□□□□ -2.01
Prpf40a-208ENSMUST00000210789 Krtap20-2E9Q0A8 60 aa2.44□□□□□ -2.02
Prpf40a-208ENSMUST00000210789 Gm39115A0A1B0GSH7 232 aa2.4□□□□□ -2.02
Prpf40a-208ENSMUST00000210789 Macf1Q9QXZ0 7354 aaKnown RBP2.38□□□□□ -2.03
Prpf40a-208ENSMUST00000210789 Gm2431E9Q8S1 172 aa2.34□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Mt1P02802 61 aaKnown RBP2.34□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Gm11559Q9D3H7 191 aa2.32□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Gm11554B1AQB2 190 aa2.32□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Gm45618A0A1B0GSA0 219 aa2.31□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Gm11568A2A4M2 211 aa2.31□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Krtap9-1Q64526 186 aa2.31□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Krtap5-2Q9D5Z7 189 aa2.3□□□□□ -2.04
Prpf40a-208ENSMUST00000210789 Gm29735A0A1B0GT06 219 aa2.22□□□□□ -2.05
Prpf40a-208ENSMUST00000210789 Mt3P28184 68 aa2.17□□□□□ -2.06
Prpf40a-208ENSMUST00000210789 Gm4553A0A1B0GSA9 284 aa2.16□□□□□ -2.06
Prpf40a-208ENSMUST00000210789 Gm11567Q9D141 195 aa2.15□□□□□ -2.07
Prpf40a-208ENSMUST00000210789 Kmt2dQ6PDK2 5588 aa2.12□□□□□ -2.07
Prpf40a-208ENSMUST00000210789 Hmcn1D3YXG0 5634 aa2.12□□□□□ -2.07
Prpf40a-208ENSMUST00000210789 Gm10153A0A1B0GRL1 320 aa2.12□□□□□ -2.07
Prpf40a-208ENSMUST00000210789 Eppk1Q8R0W0 6548 aa2.1□□□□□ -2.07
Prpf40a-208ENSMUST00000210789 Gm45337A0A1B0GS71 263 aa2.08□□□□□ -2.08
Prpf40a-208ENSMUST00000210789 Muc19Q6PZE0 7524 aa2.06□□□□□ -2.08
Prpf40a-208ENSMUST00000210789 DstQ91ZU6 7393 aaKnown RBP2.06□□□□□ -2.08
Prpf40a-208ENSMUST00000210789 Gm11639A0A1D5RLM8 5808 aa2.05□□□□□ -2.08
Prpf40a-208ENSMUST00000210789 NebE9Q1W3 7152 aa2.03□□□□□ -2.08
Prpf40a-208ENSMUST00000210789 Gm40460A0A1B0GR10 244 aa2.01□□□□□ -2.09
Prpf40a-208ENSMUST00000210789 Gm7579A0A1B0GRJ4 243 aa2.01□□□□□ -2.09
Prpf40a-208ENSMUST00000210789 Krtap5-5Q2TA51 241 aa2.01□□□□□ -2.09
Prpf40a-208ENSMUST00000210789 Krtap5-4Q62220 223 aa2.01□□□□□ -2.09
Prpf40a-208ENSMUST00000210789 Gpr98Q8VHN7 6298 aaKnown RBP1.93□□□□□ -2.1
Prpf40a-208ENSMUST00000210789 AhnakE9Q616 5656 aaKnown RBP1.8□□□□□ -2.12
Prpf40a-208ENSMUST00000210789 Sprr2bO70554 98 aa1.78□□□□□ -2.13
Prpf40a-208ENSMUST00000210789 1110025L11RikO09048 78 aa1.77□□□□□ -2.13
Prpf40a-208ENSMUST00000210789 Krtap6-5Q925H3 78 aa1.77□□□□□ -2.13
Prpf40a-208ENSMUST00000210789 Phgr1Q8K0G7 91 aa1.72□□□□□ -2.13
Prpf40a-208ENSMUST00000210789 Krtap5-1Q64507 230 aa1.62□□□□□ -2.15
Prpf40a-208ENSMUST00000210789 Gm10229O08631 77 aa1.59□□□□□ -2.16
Prpf40a-208ENSMUST00000210789 Gm4559A4IF42 199 aa1.49□□□□□ -2.17
Prpf40a-208ENSMUST00000210789 Krtap21-1Q925H4 128 aa1.41□□□□□ -2.18
Prpf40a-208ENSMUST00000210789 Krtap6-2O08884 159 aa1.36□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 75.5 ms