RNA–Protein interactions for RNA: ENSMUST00000210309.1

Usp47-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp47, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-202ENSMUST00000210309 Sprr2iO70560 76 aa2.19□□□□□ -2.06
Usp47-202ENSMUST00000210309 Muc19Q6PZE0 7524 aa2.19□□□□□ -2.06
Usp47-202ENSMUST00000210309 Lce3dE9Q8V1 98 aa2.18□□□□□ -2.06
Usp47-202ENSMUST00000210309 Lce1a2Q9D1K4 149 aa2.18□□□□□ -2.06
Usp47-202ENSMUST00000210309 Gm11569B1AQB1 180 aa2.18□□□□□ -2.06
Usp47-202ENSMUST00000210309 Sprr2fO70557 76 aa2.17□□□□□ -2.06
Usp47-202ENSMUST00000210309 Gm10142J3KMP7 120 aa2.16□□□□□ -2.06
Usp47-202ENSMUST00000210309 Lce3aQ497I5 98 aa2.16□□□□□ -2.06
Usp47-202ENSMUST00000210309 A030014E15RikA0A1Y7VJV2 120 aa2.15□□□□□ -2.07
Usp47-202ENSMUST00000210309 Krtap9-3Q3V2C1 136 aa2.14□□□□□ -2.07
Usp47-202ENSMUST00000210309 Syne2Q6ZWQ0 6874 aaKnown RBP2.13□□□□□ -2.07
Usp47-202ENSMUST00000210309 Sprr2eO70556 76 aa2.13□□□□□ -2.07
Usp47-202ENSMUST00000210309 Lce1bQ9D149 137 aa2.11□□□□□ -2.07
Usp47-202ENSMUST00000210309 Lce1fB9EJP6 147 aa2.1□□□□□ -2.07
Usp47-202ENSMUST00000210309 Lce1cQ9D1C5 147 aa2.1□□□□□ -2.07
Usp47-202ENSMUST00000210309 Lce1lQ9D1G7 135 aa2.1□□□□□ -2.07
Usp47-202ENSMUST00000210309 Lce1dQ9D731 133 aa2.1□□□□□ -2.07
Usp47-202ENSMUST00000210309 Gm10024A0A0A0MQA4 119 aa2.07□□□□□ -2.08
Usp47-202ENSMUST00000210309 Krtap4-6Q3V4B7 195 aa2.07□□□□□ -2.08
Usp47-202ENSMUST00000210309 NebE9Q1W3 7152 aa2.07□□□□□ -2.08
Usp47-202ENSMUST00000210309 Lce1eQ9D139 143 aa2.06□□□□□ -2.08
Usp47-202ENSMUST00000210309 Krtap4-2B1AQ85 167 aa2.03□□□□□ -2.08
Usp47-202ENSMUST00000210309 Mt4P47945 62 aa2.01□□□□□ -2.09
Usp47-202ENSMUST00000210309 Krtap4-1Q3UUY3 169 aa1.99□□□□□ -2.09
Usp47-202ENSMUST00000210309 Krtap4-9B1AQA9 244 aa1.97□□□□□ -2.09
Usp47-202ENSMUST00000210309 Gm11555B1AQ89 175 aa1.96□□□□□ -2.1
Usp47-202ENSMUST00000210309 Krtap19-4Q925H7 84 aa1.95□□□□□ -2.1
Usp47-202ENSMUST00000210309 Gm11596B1AQB0 205 aa1.94□□□□□ -2.1
Usp47-202ENSMUST00000210309 Gm11564A2A4L9 201 aa1.93□□□□□ -2.1
Usp47-202ENSMUST00000210309 Gm11563B1AQ90 168 aa1.93□□□□□ -2.1
Usp47-202ENSMUST00000210309 Gm11595B1AQA7 289 aa1.93□□□□□ -2.1
Usp47-202ENSMUST00000210309 Krtap4-8B1AQA8 209 aa1.93□□□□□ -2.1
Usp47-202ENSMUST00000210309 Gpr98Q8VHN7 6298 aaKnown RBP1.93□□□□□ -2.1
Usp47-202ENSMUST00000210309 Kmt2dQ6PDK2 5588 aa1.93□□□□□ -2.1
Usp47-202ENSMUST00000210309 Krtap4-13Q9D7P3 165 aa1.9□□□□□ -2.11
Usp47-202ENSMUST00000210309 Sprr2dO70555 85 aa1.87□□□□□ -2.11
Usp47-202ENSMUST00000210309 Gm11639A0A1D5RLM8 5808 aa1.85□□□□□ -2.11
Usp47-202ENSMUST00000210309 2300003K06RikA2A4M0 262 aa1.84□□□□□ -2.11
Usp47-202ENSMUST00000210309 Sprr2hO70559 108 aa1.84□□□□□ -2.11
Usp47-202ENSMUST00000210309 Krtap31-1Q9D644 177 aa1.83□□□□□ -2.12
Usp47-202ENSMUST00000210309 Gm11938Q9D3H4 131 aa1.82□□□□□ -2.12
Usp47-202ENSMUST00000210309 Krtap4-7Q9D732 168 aa1.82□□□□□ -2.12
Usp47-202ENSMUST00000210309 Lce1kJ3QP15 125 aa1.78□□□□□ -2.12
Usp47-202ENSMUST00000210309 Krtap31-2Q8CAY5 177 aa1.76□□□□□ -2.13
Usp47-202ENSMUST00000210309 Hmcn1D3YXG0 5634 aa1.74□□□□□ -2.13
Usp47-202ENSMUST00000210309 A0A286YCP9 139 aa1.74□□□□□ -2.13
Usp47-202ENSMUST00000210309 Lce1a1Q9CQH5 143 aa1.74□□□□□ -2.13
Usp47-202ENSMUST00000210309 Sprr2bO70554 98 aa1.73□□□□□ -2.13
Usp47-202ENSMUST00000210309 Krtap20-2E9Q0A8 60 aa1.72□□□□□ -2.13
Usp47-202ENSMUST00000210309 Eppk1Q8R0W0 6548 aa1.7□□□□□ -2.14
Usp47-202ENSMUST00000210309 Krtap4-16Q91W93 202 aa1.69□□□□□ -2.14
Usp47-202ENSMUST00000210309 Mt3P28184 68 aa1.67□□□□□ -2.14
Usp47-202ENSMUST00000210309 Krtap6-3A0A087WQL6 57 aa1.66□□□□□ -2.14
Usp47-202ENSMUST00000210309 Gm11554B1AQB2 190 aa1.65□□□□□ -2.14
Usp47-202ENSMUST00000210309 Mt1P02802 61 aaKnown RBP1.58□□□□□ -2.16
Usp47-202ENSMUST00000210309 Gm11568A2A4M2 211 aa1.52□□□□□ -2.17
Usp47-202ENSMUST00000210309 Krtap9-1Q64526 186 aa1.52□□□□□ -2.17
Usp47-202ENSMUST00000210309 Krtap5-2Q9D5Z7 189 aa1.48□□□□□ -2.17
Usp47-202ENSMUST00000210309 Gm45337A0A1B0GS71 263 aa1.43□□□□□ -2.18
Usp47-202ENSMUST00000210309 AhnakE9Q616 5656 aaKnown RBP1.43□□□□□ -2.18
Usp47-202ENSMUST00000210309 Gm11559Q9D3H7 191 aa1.42□□□□□ -2.18
Usp47-202ENSMUST00000210309 Gm4553A0A1B0GSA9 284 aa1.4□□□□□ -2.19
Usp47-202ENSMUST00000210309 Gm40460A0A1B0GR10 244 aa1.38□□□□□ -2.19
Usp47-202ENSMUST00000210309 Gm7579A0A1B0GRJ4 243 aa1.38□□□□□ -2.19
Usp47-202ENSMUST00000210309 Krtap5-5Q2TA51 241 aa1.38□□□□□ -2.19
Usp47-202ENSMUST00000210309 Krtap5-4Q62220 223 aa1.38□□□□□ -2.19
Usp47-202ENSMUST00000210309 Gm39115A0A1B0GSH7 232 aa1.38□□□□□ -2.19
Usp47-202ENSMUST00000210309 Gm45618A0A1B0GSA0 219 aa1.36□□□□□ -2.19
Usp47-202ENSMUST00000210309 Gm10153A0A1B0GRL1 320 aa1.35□□□□□ -2.19
Usp47-202ENSMUST00000210309 Gm2431E9Q8S1 172 aa1.34□□□□□ -2.2
Usp47-202ENSMUST00000210309 1110025L11RikO09048 78 aa1.27□□□□□ -2.21
Usp47-202ENSMUST00000210309 Krtap6-5Q925H3 78 aa1.27□□□□□ -2.21
Usp47-202ENSMUST00000210309 Gm10229O08631 77 aa1.18□□□□□ -2.22
Usp47-202ENSMUST00000210309 Phgr1Q8K0G7 91 aa1.14□□□□□ -2.23
Usp47-202ENSMUST00000210309 Gm11567Q9D141 195 aa1.06□□□□□ -2.24
Usp47-202ENSMUST00000210309 Gm29735A0A1B0GT06 219 aa1.02□□□□□ -2.25
Usp47-202ENSMUST00000210309 Krtap6-2O08884 159 aa1□□□□□ -2.25
Usp47-202ENSMUST00000210309 Krtap21-1Q925H4 128 aa0.99□□□□□ -2.25
Usp47-202ENSMUST00000210309 Krtap5-1Q64507 230 aa0.82□□□□□ -2.28
Usp47-202ENSMUST00000210309 Gm4559A4IF42 199 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 385.3 ms