RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Gm10100J3QK64 120 aa3.17□□□□□ -1.9
Pdgfra-208ENSMUST00000202681 Gm11938Q9D3H4 131 aa3.14□□□□□ -1.91
Pdgfra-208ENSMUST00000202681 Mt2P02798 61 aa3.1□□□□□ -1.91
Pdgfra-208ENSMUST00000202681 Krtap4-6Q3V4B7 195 aa3.1□□□□□ -1.91
Pdgfra-208ENSMUST00000202681 Sprr2dO70555 85 aa3.07□□□□□ -1.92
Pdgfra-208ENSMUST00000202681 Lce1a1Q9CQH5 143 aa3.06□□□□□ -1.92
Pdgfra-208ENSMUST00000202681 Lce1gQ9D195 139 aa3.06□□□□□ -1.92
Pdgfra-208ENSMUST00000202681 Syne2Q6ZWQ0 6874 aaKnown RBP3.06□□□□□ -1.92
Pdgfra-208ENSMUST00000202681 Fsip2A2ARZ3 6995 aa3.05□□□□□ -1.92
Pdgfra-208ENSMUST00000202681 Gm10142J3KMP7 120 aa3□□□□□ -1.93
Pdgfra-208ENSMUST00000202681 Gm11596B1AQB0 205 aa2.98□□□□□ -1.93
Pdgfra-208ENSMUST00000202681 2300003K06RikA2A4M0 262 aa2.98□□□□□ -1.93
Pdgfra-208ENSMUST00000202681 Krtap9-1Q64526 186 aa2.95□□□□□ -1.94
Pdgfra-208ENSMUST00000202681 Sprr2iO70560 76 aa2.94□□□□□ -1.94
Pdgfra-208ENSMUST00000202681 Lce1cQ9D1C5 147 aa2.92□□□□□ -1.94
Pdgfra-208ENSMUST00000202681 Gm11564A2A4L9 201 aa2.91□□□□□ -1.94
Pdgfra-208ENSMUST00000202681 Gm11595B1AQA7 289 aa2.91□□□□□ -1.94
Pdgfra-208ENSMUST00000202681 Krtap4-8B1AQA8 209 aa2.91□□□□□ -1.94
Pdgfra-208ENSMUST00000202681 Mt4P47945 62 aa2.89□□□□□ -1.95
Pdgfra-208ENSMUST00000202681 Gm10272F7CZ33 110 aa2.88□□□□□ -1.95
Pdgfra-208ENSMUST00000202681 Krtap22-2J3QNX6 67 aa2.88□□□□□ -1.95
Pdgfra-208ENSMUST00000202681 Krtap4-9B1AQA9 244 aa2.86□□□□□ -1.95
Pdgfra-208ENSMUST00000202681 Gm45618A0A1B0GSA0 219 aa2.82□□□□□ -1.96
Pdgfra-208ENSMUST00000202681 Lce1fB9EJP6 147 aa2.82□□□□□ -1.96
Pdgfra-208ENSMUST00000202681 Lce1lQ9D1G7 135 aa2.8□□□□□ -1.96
Pdgfra-208ENSMUST00000202681 Krtap4-13Q9D7P3 165 aa2.8□□□□□ -1.96
Pdgfra-208ENSMUST00000202681 Krtap19-4Q925H7 84 aa2.79□□□□□ -1.96
Pdgfra-208ENSMUST00000202681 Lce3bQ9CQM7 98 aa2.79□□□□□ -1.96
Pdgfra-208ENSMUST00000202681 Sprr2fO70557 76 aa2.79□□□□□ -1.96
Pdgfra-208ENSMUST00000202681 Syne1Q6ZWR6 8799 aa2.75□□□□□ -1.97
Pdgfra-208ENSMUST00000202681 Sprr2eO70556 76 aa2.74□□□□□ -1.97
Pdgfra-208ENSMUST00000202681 Gm11568A2A4M2 211 aa2.73□□□□□ -1.97
Pdgfra-208ENSMUST00000202681 Lce3cQ91V05 98 aa2.72□□□□□ -1.97
Pdgfra-208ENSMUST00000202681 Lce3dE9Q8V1 98 aa2.72□□□□□ -1.97
Pdgfra-208ENSMUST00000202681 Sprr2hO70559 108 aa2.72□□□□□ -1.97
Pdgfra-208ENSMUST00000202681 Sprr2kO70562 68 aa2.69□□□□□ -1.98
Pdgfra-208ENSMUST00000202681 Lce3eF8VQJ0 98 aa2.67□□□□□ -1.98
Pdgfra-208ENSMUST00000202681 Lce3fQ6PAI4 98 aa2.67□□□□□ -1.98
Pdgfra-208ENSMUST00000202681 Lce3aQ497I5 98 aa2.63□□□□□ -1.99
Pdgfra-208ENSMUST00000202681 Eppk1Q8R0W0 6548 aa2.61□□□□□ -1.99
Pdgfra-208ENSMUST00000202681 Gm39115A0A1B0GSH7 232 aa2.61□□□□□ -1.99
Pdgfra-208ENSMUST00000202681 Krtap6-3A0A087WQL6 57 aa2.59□□□□□ -1.99
Pdgfra-208ENSMUST00000202681 Krtap4-16Q91W93 202 aa2.59□□□□□ -1.99
Pdgfra-208ENSMUST00000202681 Macf1Q9QXZ0 7354 aaKnown RBP2.55□□□□□ -2
Pdgfra-208ENSMUST00000202681 Lce1kJ3QP15 125 aa2.5□□□□□ -2.01
Pdgfra-208ENSMUST00000202681 Krtap20-2E9Q0A8 60 aa2.48□□□□□ -2.01
Pdgfra-208ENSMUST00000202681 ObscnA2AAJ9 8891 aaKnown RBP2.45□□□□□ -2.02
Pdgfra-208ENSMUST00000202681 Gm11554B1AQB2 190 aa2.42□□□□□ -2.02
Pdgfra-208ENSMUST00000202681 Mt3P28184 68 aa2.4□□□□□ -2.02
Pdgfra-208ENSMUST00000202681 Gm11639A0A1D5RLM8 5808 aa2.4□□□□□ -2.03
Pdgfra-208ENSMUST00000202681 Gm29735A0A1B0GT06 219 aa2.37□□□□□ -2.03
Pdgfra-208ENSMUST00000202681 Gpr98Q8VHN7 6298 aaKnown RBP2.37□□□□□ -2.03
Pdgfra-208ENSMUST00000202681 Gm11567Q9D141 195 aa2.36□□□□□ -2.03
Pdgfra-208ENSMUST00000202681 Gm10024A0A0A0MQA4 119 aa2.36□□□□□ -2.03
Pdgfra-208ENSMUST00000202681 Kmt2dQ6PDK2 5588 aa2.31□□□□□ -2.04
Pdgfra-208ENSMUST00000202681 Mt1P02802 61 aaKnown RBP2.28□□□□□ -2.04
Pdgfra-208ENSMUST00000202681 Krtap5-2Q9D5Z7 189 aa2.25□□□□□ -2.05
Pdgfra-208ENSMUST00000202681 Hmcn1D3YXG0 5634 aa2.25□□□□□ -2.05
Pdgfra-208ENSMUST00000202681 Muc16A0A140LJ72 8478 aa2.25□□□□□ -2.05
Pdgfra-208ENSMUST00000202681 Gm2431E9Q8S1 172 aa2.22□□□□□ -2.05
Pdgfra-208ENSMUST00000202681 Muc19Q6PZE0 7524 aa2.16□□□□□ -2.06
Pdgfra-208ENSMUST00000202681 Gm10153A0A1B0GRL1 320 aa2.12□□□□□ -2.07
Pdgfra-208ENSMUST00000202681 Gm45337A0A1B0GS71 263 aa2.11□□□□□ -2.07
Pdgfra-208ENSMUST00000202681 DstQ91ZU6 7393 aaKnown RBP2.1□□□□□ -2.07
Pdgfra-208ENSMUST00000202681 Gm4553A0A1B0GSA9 284 aa2.09□□□□□ -2.08
Pdgfra-208ENSMUST00000202681 NebE9Q1W3 7152 aa2.07□□□□□ -2.08
Pdgfra-208ENSMUST00000202681 Krtap5-4Q62220 223 aa1.99□□□□□ -2.09
Pdgfra-208ENSMUST00000202681 Krtap5-1Q64507 230 aa1.99□□□□□ -2.09
Pdgfra-208ENSMUST00000202681 Gm40460A0A1B0GR10 244 aa1.93□□□□□ -2.1
Pdgfra-208ENSMUST00000202681 Gm7579A0A1B0GRJ4 243 aa1.93□□□□□ -2.1
Pdgfra-208ENSMUST00000202681 Krtap5-5Q2TA51 241 aa1.93□□□□□ -2.1
Pdgfra-208ENSMUST00000202681 Gm4559A4IF42 199 aa1.91□□□□□ -2.1
Pdgfra-208ENSMUST00000202681 AhnakE9Q616 5656 aaKnown RBP1.81□□□□□ -2.12
Pdgfra-208ENSMUST00000202681 Gm10229O08631 77 aa1.77□□□□□ -2.13
Pdgfra-208ENSMUST00000202681 1110025L11RikO09048 78 aa1.77□□□□□ -2.13
Pdgfra-208ENSMUST00000202681 Krtap6-5Q925H3 78 aa1.77□□□□□ -2.13
Pdgfra-208ENSMUST00000202681 Sprr2bO70554 98 aa1.76□□□□□ -2.13
Pdgfra-208ENSMUST00000202681 Phgr1Q8K0G7 91 aa1.61□□□□□ -2.15
Pdgfra-208ENSMUST00000202681 Krtap21-1Q925H4 128 aa1.47□□□□□ -2.17
Pdgfra-208ENSMUST00000202681 Krtap6-2O08884 159 aa1.3□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 130.3 ms