RNA–Protein interactions for RNA: ENSMUST00000195975.4

Pdlim5-206, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,845 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-206ENSMUST00000195975 Lce1dQ9D731 133 aa4.57□□□□□ -1.68
Pdlim5-206ENSMUST00000195975 Krtap31-1Q9D644 177 aa4.54□□□□□ -1.68
Pdlim5-206ENSMUST00000195975 2310046K23RikA0A0A6YVW6 87 aa4.53□□□□□ -1.68
Pdlim5-206ENSMUST00000195975 Ndufaf8A2AMZ4 74 aa4.51□□□□□ -1.69
Pdlim5-206ENSMUST00000195975 Lce1eQ9D139 143 aa4.49□□□□□ -1.69
Pdlim5-206ENSMUST00000195975 A0A1Y7VLE6 161 aa4.47□□□□□ -1.69
Pdlim5-206ENSMUST00000195975 Sprr2iO70560 76 aa4.46□□□□□ -1.7
Pdlim5-206ENSMUST00000195975 Syne1Q6ZWR6 8799 aa4.44□□□□□ -1.7
Pdlim5-206ENSMUST00000195975 Gm10272F7CZ33 110 aa4.43□□□□□ -1.7
Pdlim5-206ENSMUST00000195975 Krtap5-2Q9D5Z7 189 aa4.43□□□□□ -1.7
Pdlim5-206ENSMUST00000195975 Lce1kJ3QP15 125 aa4.42□□□□□ -1.7
Pdlim5-206ENSMUST00000195975 Krtap28-13A0A087WQP5 138 aa4.4□□□□□ -1.7
Pdlim5-206ENSMUST00000195975 Lce3bQ9CQM7 98 aa4.4□□□□□ -1.7
Pdlim5-206ENSMUST00000195975 Gm11559Q9D3H7 191 aa4.31□□□□□ -1.72
Pdlim5-206ENSMUST00000195975 Gm11568A2A4M2 211 aa4.28□□□□□ -1.72
Pdlim5-206ENSMUST00000195975 Krtap9-1Q64526 186 aa4.28□□□□□ -1.72
Pdlim5-206ENSMUST00000195975 Tnp1P10856 55 aa4.28□□□□□ -1.72
Pdlim5-206ENSMUST00000195975 A030005K14RikA0A1Y7VNY1 122 aa4.27□□□□□ -1.73
Pdlim5-206ENSMUST00000195975 A030005L19RikA0A1Y7VIU2 113 aa4.26□□□□□ -1.73
Pdlim5-206ENSMUST00000195975 Gm9112A2AI92 75 aa4.24□□□□□ -1.73
Pdlim5-206ENSMUST00000195975 Eppk1Q8R0W0 6548 aa4.23□□□□□ -1.73
Pdlim5-206ENSMUST00000195975 Gm4553A0A1B0GSA9 284 aa4.21□□□□□ -1.74
Pdlim5-206ENSMUST00000195975 Gm11554B1AQB2 190 aa4.21□□□□□ -1.74
Pdlim5-206ENSMUST00000195975 Lce1fB9EJP6 147 aa4.19□□□□□ -1.74
Pdlim5-206ENSMUST00000195975 Lce1cQ9D1C5 147 aa4.19□□□□□ -1.74
Pdlim5-206ENSMUST00000195975 Macf1Q9QXZ0 7354 aaKnown RBP4.18□□□□□ -1.74
Pdlim5-206ENSMUST00000195975 Kmt2dQ6PDK2 5588 aa4.12□□□□□ -1.75
Pdlim5-206ENSMUST00000195975 Gm7544A0A1Y7VJ58 118 aa4.11□□□□□ -1.75
Pdlim5-206ENSMUST00000195975 Gm2431E9Q8S1 172 aa4.09□□□□□ -1.76
Pdlim5-206ENSMUST00000195975 Gm11938Q9D3H4 131 aa4.09□□□□□ -1.76
Pdlim5-206ENSMUST00000195975 Gm45337A0A1B0GS71 263 aa4.05□□□□□ -1.76
Pdlim5-206ENSMUST00000195975 Mt1P02802 61 aaKnown RBP4.05□□□□□ -1.76
Pdlim5-206ENSMUST00000195975 Gm10153A0A1B0GRL1 320 aa3.99□□□□□ -1.77
Pdlim5-206ENSMUST00000195975 Krtap19-4Q925H7 84 aa3.98□□□□□ -1.77
Pdlim5-206ENSMUST00000195975 Lce3cQ91V05 98 aa3.97□□□□□ -1.77
Pdlim5-206ENSMUST00000195975 Hmcn1D3YXG0 5634 aa3.92□□□□□ -1.78
Pdlim5-206ENSMUST00000195975 Gm40460A0A1B0GR10 244 aa3.91□□□□□ -1.78
Pdlim5-206ENSMUST00000195975 Gm7579A0A1B0GRJ4 243 aa3.91□□□□□ -1.78
Pdlim5-206ENSMUST00000195975 Krtap5-5Q2TA51 241 aa3.91□□□□□ -1.78
Pdlim5-206ENSMUST00000195975 Krtap5-4Q62220 223 aa3.91□□□□□ -1.78
Pdlim5-206ENSMUST00000195975 Gm11639A0A1D5RLM8 5808 aa3.91□□□□□ -1.78
Pdlim5-206ENSMUST00000195975 Lce3dE9Q8V1 98 aa3.91□□□□□ -1.78
Pdlim5-206ENSMUST00000195975 Muc19Q6PZE0 7524 aa3.89□□□□□ -1.79
Pdlim5-206ENSMUST00000195975 A0A1Y7VJ07 166 aa3.86□□□□□ -1.79
Pdlim5-206ENSMUST00000195975 Gm39115A0A1B0GSH7 232 aa3.82□□□□□ -1.8
Pdlim5-206ENSMUST00000195975 Lce3eF8VQJ0 98 aa3.81□□□□□ -1.8
Pdlim5-206ENSMUST00000195975 Lce3fQ6PAI4 98 aa3.81□□□□□ -1.8
Pdlim5-206ENSMUST00000195975 ObscnA2AAJ9 8891 aaKnown RBP3.79□□□□□ -1.8
Pdlim5-206ENSMUST00000195975 DstQ91ZU6 7393 aaKnown RBP3.74□□□□□ -1.81
Pdlim5-206ENSMUST00000195975 Mt3P28184 68 aa3.72□□□□□ -1.81
Pdlim5-206ENSMUST00000195975 Gpr98Q8VHN7 6298 aaKnown RBP3.71□□□□□ -1.82
Pdlim5-206ENSMUST00000195975 A030003K21RikA0A1Y7VIM3 128 aa3.7□□□□□ -1.82
Pdlim5-206ENSMUST00000195975 4933428G20RikQ9D3X4 101 aa3.7□□□□□ -1.82
Pdlim5-206ENSMUST00000195975 Sprr2dO70555 85 aa3.7□□□□□ -1.82
Pdlim5-206ENSMUST00000195975 A030014E15RikA0A1Y7VJV2 120 aa3.66□□□□□ -1.82
Pdlim5-206ENSMUST00000195975 Lce3aQ497I5 98 aa3.65□□□□□ -1.83
Pdlim5-206ENSMUST00000195975 Sprr2fO70557 76 aa3.58□□□□□ -1.84
Pdlim5-206ENSMUST00000195975 NebE9Q1W3 7152 aa3.57□□□□□ -1.84
Pdlim5-206ENSMUST00000195975 Krtap4-16Q91W93 202 aa3.56□□□□□ -1.84
Pdlim5-206ENSMUST00000195975 Gm10100J3QK64 120 aa3.54□□□□□ -1.84
Pdlim5-206ENSMUST00000195975 Gm45618A0A1B0GSA0 219 aa3.53□□□□□ -1.84
Pdlim5-206ENSMUST00000195975 Gm6217A0A1Y7VJK9 128 aa3.5□□□□□ -1.85
Pdlim5-206ENSMUST00000195975 AhnakE9Q616 5656 aaKnown RBP3.48□□□□□ -1.85
Pdlim5-206ENSMUST00000195975 A0A286YCP9 139 aa3.39□□□□□ -1.87
Pdlim5-206ENSMUST00000195975 Sprr2eO70556 76 aa3.31□□□□□ -1.88
Pdlim5-206ENSMUST00000195975 Gm10142J3KMP7 120 aa3.3□□□□□ -1.88
Pdlim5-206ENSMUST00000195975 Gm10024A0A0A0MQA4 119 aa3.21□□□□□ -1.9
Pdlim5-206ENSMUST00000195975 Sprr2hO70559 108 aa3.19□□□□□ -1.9
Pdlim5-206ENSMUST00000195975 1110025L11RikO09048 78 aa2.93□□□□□ -1.94
Pdlim5-206ENSMUST00000195975 Krtap6-5Q925H3 78 aa2.93□□□□□ -1.94
Pdlim5-206ENSMUST00000195975 Muc16A0A140LJ72 8478 aa2.89□□□□□ -1.95
Pdlim5-206ENSMUST00000195975 Gm29735A0A1B0GT06 219 aa2.89□□□□□ -1.95
Pdlim5-206ENSMUST00000195975 Gm11567Q9D141 195 aa2.75□□□□□ -1.97
Pdlim5-206ENSMUST00000195975 Gm10229O08631 77 aa2.62□□□□□ -1.99
Pdlim5-206ENSMUST00000195975 Krtap21-1Q925H4 128 aa2.36□□□□□ -2.03
Pdlim5-206ENSMUST00000195975 Krtap6-2O08884 159 aa2.32□□□□□ -2.04
Pdlim5-206ENSMUST00000195975 Sprr2bO70554 98 aa2.28□□□□□ -2.04
Pdlim5-206ENSMUST00000195975 Krtap5-1Q64507 230 aa2.17□□□□□ -2.06
Pdlim5-206ENSMUST00000195975 Phgr1Q8K0G7 91 aa1.93□□□□□ -2.1
Pdlim5-206ENSMUST00000195975 Gm4559A4IF42 199 aa1.84□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 247.9 ms