RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 Mdn1A2ANY6 5589 aaKnown RBP3.16□□□□□ -1.9
Ccdc71-202ENSMUST00000193170 Lce1lQ9D1G7 135 aa3.15□□□□□ -1.91
Ccdc71-202ENSMUST00000193170 Mt2P02798 61 aa3.14□□□□□ -1.91
Ccdc71-202ENSMUST00000193170 Krtap4-9B1AQA9 244 aa3.12□□□□□ -1.91
Ccdc71-202ENSMUST00000193170 Gm6358A0A087WPH4 74 aa3.11□□□□□ -1.91
Ccdc71-202ENSMUST00000193170 Gm11938Q9D3H4 131 aa3.06□□□□□ -1.92
Ccdc71-202ENSMUST00000193170 Gm10100J3QK64 120 aa3.04□□□□□ -1.92
Ccdc71-202ENSMUST00000193170 Sprr2gO70558 76 aa3.03□□□□□ -1.92
Ccdc71-202ENSMUST00000193170 Lce1cQ9D1C5 147 aa3.03□□□□□ -1.92
Ccdc71-202ENSMUST00000193170 Sprr2fO70557 76 aa3□□□□□ -1.93
Ccdc71-202ENSMUST00000193170 Krtap4-13Q9D7P3 165 aa3□□□□□ -1.93
Ccdc71-202ENSMUST00000193170 Mt4P47945 62 aa2.99□□□□□ -1.93
Ccdc71-202ENSMUST00000193170 Fsip2A2ARZ3 6995 aa2.99□□□□□ -1.93
Ccdc71-202ENSMUST00000193170 Krtap20-2E9Q0A8 60 aa2.98□□□□□ -1.93
Ccdc71-202ENSMUST00000193170 Gm10142J3KMP7 120 aa2.97□□□□□ -1.93
Ccdc71-202ENSMUST00000193170 Sprr2kO70562 68 aa2.96□□□□□ -1.94
Ccdc71-202ENSMUST00000193170 Sprr2dO70555 85 aa2.94□□□□□ -1.94
Ccdc71-202ENSMUST00000193170 Lce1fB9EJP6 147 aa2.93□□□□□ -1.94
Ccdc71-202ENSMUST00000193170 Lce1a1Q9CQH5 143 aa2.93□□□□□ -1.94
Ccdc71-202ENSMUST00000193170 Syne1Q6ZWR6 8799 aa2.91□□□□□ -1.94
Ccdc71-202ENSMUST00000193170 Krtap22-2J3QNX6 67 aa2.89□□□□□ -1.95
Ccdc71-202ENSMUST00000193170 Gm11639A0A1D5RLM8 5808 aa2.89□□□□□ -1.95
Ccdc71-202ENSMUST00000193170 Gpr98Q8VHN7 6298 aaKnown RBP2.81□□□□□ -1.96
Ccdc71-202ENSMUST00000193170 Lce3bQ9CQM7 98 aa2.81□□□□□ -1.96
Ccdc71-202ENSMUST00000193170 A030005L19RikA0A1Y7VIU2 113 aa2.74□□□□□ -1.97
Ccdc71-202ENSMUST00000193170 Lce3cQ91V05 98 aa2.72□□□□□ -1.97
Ccdc71-202ENSMUST00000193170 Lce3dE9Q8V1 98 aa2.7□□□□□ -1.98
Ccdc71-202ENSMUST00000193170 Krtap19-4Q925H7 84 aa2.7□□□□□ -1.98
Ccdc71-202ENSMUST00000193170 Krtap4-16Q91W93 202 aa2.69□□□□□ -1.98
Ccdc71-202ENSMUST00000193170 ObscnA2AAJ9 8891 aaKnown RBP2.66□□□□□ -1.98
Ccdc71-202ENSMUST00000193170 Sprr2hO70559 108 aa2.64□□□□□ -1.99
Ccdc71-202ENSMUST00000193170 Lce3eF8VQJ0 98 aa2.61□□□□□ -1.99
Ccdc71-202ENSMUST00000193170 Lce3fQ6PAI4 98 aa2.61□□□□□ -1.99
Ccdc71-202ENSMUST00000193170 Lce3aQ497I5 98 aa2.58□□□□□ -2
Ccdc71-202ENSMUST00000193170 Kmt2dQ6PDK2 5588 aa2.57□□□□□ -2
Ccdc71-202ENSMUST00000193170 Muc16A0A140LJ72 8478 aa2.57□□□□□ -2
Ccdc71-202ENSMUST00000193170 Sprr2eO70556 76 aa2.56□□□□□ -2
Ccdc71-202ENSMUST00000193170 Macf1Q9QXZ0 7354 aaKnown RBP2.55□□□□□ -2
Ccdc71-202ENSMUST00000193170 Gm11554B1AQB2 190 aa2.49□□□□□ -2.01
Ccdc71-202ENSMUST00000193170 Mt3P28184 68 aa2.49□□□□□ -2.01
Ccdc71-202ENSMUST00000193170 A0A1Y7VJH8 109 aa2.45□□□□□ -2.02
Ccdc71-202ENSMUST00000193170 Hmcn1D3YXG0 5634 aa2.44□□□□□ -2.02
Ccdc71-202ENSMUST00000193170 Krtap5-2Q9D5Z7 189 aa2.43□□□□□ -2.02
Ccdc71-202ENSMUST00000193170 Gm4553A0A1B0GSA9 284 aa2.42□□□□□ -2.02
Ccdc71-202ENSMUST00000193170 Muc19Q6PZE0 7524 aa2.42□□□□□ -2.02
Ccdc71-202ENSMUST00000193170 Gm11567Q9D141 195 aa2.36□□□□□ -2.03
Ccdc71-202ENSMUST00000193170 Lce1kJ3QP15 125 aa2.36□□□□□ -2.03
Ccdc71-202ENSMUST00000193170 Mt1P02802 61 aaKnown RBP2.34□□□□□ -2.03
Ccdc71-202ENSMUST00000193170 Gm2431E9Q8S1 172 aa2.32□□□□□ -2.04
Ccdc71-202ENSMUST00000193170 DstQ91ZU6 7393 aaKnown RBP2.31□□□□□ -2.04
Ccdc71-202ENSMUST00000193170 Gm7544A0A1Y7VJ58 118 aa2.3□□□□□ -2.04
Ccdc71-202ENSMUST00000193170 NebE9Q1W3 7152 aa2.29□□□□□ -2.04
Ccdc71-202ENSMUST00000193170 Gm45618A0A1B0GSA0 219 aa2.25□□□□□ -2.05
Ccdc71-202ENSMUST00000193170 Gm39115A0A1B0GSH7 232 aa2.25□□□□□ -2.05
Ccdc71-202ENSMUST00000193170 Gm45337A0A1B0GS71 263 aa2.24□□□□□ -2.05
Ccdc71-202ENSMUST00000193170 Krtap28-10A0A1Y7VP58 119 aa2.23□□□□□ -2.05
Ccdc71-202ENSMUST00000193170 Gm10153A0A1B0GRL1 320 aa2.17□□□□□ -2.06
Ccdc71-202ENSMUST00000193170 AhnakE9Q616 5656 aaKnown RBP2.17□□□□□ -2.06
Ccdc71-202ENSMUST00000193170 Gm40460A0A1B0GR10 244 aa2.15□□□□□ -2.07
Ccdc71-202ENSMUST00000193170 Gm7579A0A1B0GRJ4 243 aa2.15□□□□□ -2.07
Ccdc71-202ENSMUST00000193170 A0A1Y7VLE6 161 aa2.15□□□□□ -2.07
Ccdc71-202ENSMUST00000193170 Krtap5-5Q2TA51 241 aa2.15□□□□□ -2.07
Ccdc71-202ENSMUST00000193170 Krtap5-4Q62220 223 aa2.15□□□□□ -2.07
Ccdc71-202ENSMUST00000193170 A030005K14RikA0A1Y7VNY1 122 aa2.07□□□□□ -2.08
Ccdc71-202ENSMUST00000193170 A030003K21RikA0A1Y7VIM3 128 aa2.07□□□□□ -2.08
Ccdc71-202ENSMUST00000193170 Gm6217A0A1Y7VJK9 128 aa2.07□□□□□ -2.08
Ccdc71-202ENSMUST00000193170 A0A286YCP9 139 aa2.02□□□□□ -2.09
Ccdc71-202ENSMUST00000193170 Krtap28-13A0A087WQP5 138 aa1.93□□□□□ -2.1
Ccdc71-202ENSMUST00000193170 A0A1Y7VJ07 166 aa1.91□□□□□ -2.1
Ccdc71-202ENSMUST00000193170 1110025L11RikO09048 78 aa1.81□□□□□ -2.12
Ccdc71-202ENSMUST00000193170 Krtap6-5Q925H3 78 aa1.81□□□□□ -2.12
Ccdc71-202ENSMUST00000193170 Gm10229O08631 77 aa1.78□□□□□ -2.12
Ccdc71-202ENSMUST00000193170 A030014E15RikA0A1Y7VJV2 120 aa1.71□□□□□ -2.14
Ccdc71-202ENSMUST00000193170 Sprr2bO70554 98 aa1.68□□□□□ -2.14
Ccdc71-202ENSMUST00000193170 Phgr1Q8K0G7 91 aa1.57□□□□□ -2.16
Ccdc71-202ENSMUST00000193170 Gm29735A0A1B0GT06 219 aa1.56□□□□□ -2.16
Ccdc71-202ENSMUST00000193170 Krtap21-1Q925H4 128 aa1.5□□□□□ -2.17
Ccdc71-202ENSMUST00000193170 Krtap5-1Q64507 230 aa1.42□□□□□ -2.18
Ccdc71-202ENSMUST00000193170 Krtap6-2O08884 159 aa1.41□□□□□ -2.18
Ccdc71-202ENSMUST00000193170 Gm4559A4IF42 199 aa1.1□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 44.5 ms